Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR002182
Description
NB-ARC

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyonBd113CH_bdi_15510430.000000152093
Brachypodium distachyonBd413CH_bdi_175680.000000438261
Brachypodium distachyonBd413CH_bdi_828110.00000000020865
Brachypodium distachyonBd413CH_bdi_190690.00000130454
Brachypodium distachyonBd114CH_bdi_2510430.000000152093
Brachypodium distachyonBd214CH_bdi_1914820.00000000079641
Brachypodium distachyonBd414CH_bdi_29172740.0000236419
Brachypodium distachyonBd414CH_bdi_2410400.0000000689052
Brachypodium distachyonBd415CH_bdi_5670.00000000335405
Carica papayasupercontig_1613CH_cpa_257110.000000000000486596
Carica papayasupercontig_2713CH_cpa_496110.000000000400255
Musa acuminatachr1013CH_mac_410126.54417e-20
Musa acuminatachr313CH_mac_68550.00000000690959
Musa acuminatachr1014CH_mac_410126.54417e-20
Musa acuminatachr1015CH_mac_18330.000192742
Oryza sativa ssp. indicaChr0113CH_osaindica_2218100.000000000491624
Oryza sativa ssp. indicaChr0113CH_osaindica_859580.000473169
Oryza sativa ssp. indicaChr0413CH_osaindica_4398210.00000199848
Oryza sativa ssp. indicaChr0513CH_osaindica_9349570.000678757
Oryza sativa ssp. indicaChr0713CH_osaindica_2379160.00000000128855
Oryza sativa ssp. indicaChr0713CH_osaindica_450680.00000259709
Oryza sativa ssp. indicaChr0813CH_osaindica_7449500.000202392
Oryza sativa ssp. indicaChr0813CH_osaindica_734570.000179065
Oryza sativa ssp. indicaChr1113CH_osaindica_8678390.000507712
Oryza sativa ssp. indicaChr1113CH_osaindica_10917660.0000000000000329131
Oryza sativa ssp. indicaChr1113CH_osaindica_2869190.0000000101039
Oryza sativa ssp. indicaChr1113CH_osaindica_50011660.0000087571
Oryza sativa ssp. indicaChr1113CH_osaindica_17111240.0000000000308792
Oryza sativa ssp. indicaChr1113CH_osaindica_19111260.0000000000936974
Oryza sativa ssp. indicaChr1114CH_osaindica_70211300.0000000000000990604
Oryza sativa ssp. indicaChr1114CH_osaindica_7511240.0000000000308792
Oryza sativa ssp. indicaChr1114CH_osaindica_45271483.22124e-20
Oryza sativa ssp. indicaChr1214CH_osaindica_102192750.0000175641
Oryza sativa ssp. indicaChr1115CH_osaindica_277240.0000109693
Oryza sativa ssp. indicaChr1116CH_osaindica_1141570.000000281145
Oryza sativa ssp. japonica113CH_osa_182770.00000000031844
Oryza sativa ssp. japonica1113CH_osa_1819160.000000000287524
Oryza sativa ssp. japonica1113CH_osa_3557130.000000520654
Oryza sativa ssp. japonica1113CH_osa_10415530.0000000000000672507
Oryza sativa ssp. japonica1113CH_osa_762440.000410454
Oryza sativa ssp. japonica1113CH_osa_4628290.0000105395
Oryza sativa ssp. japonica1113CH_osa_17813550.00000000018513
Oryza sativa ssp. japonica1113CH_osa_8716560.00000000000000396764
Oryza sativa ssp. japonica1213CH_osa_8425100.000916285
Oryza sativa ssp. japonica1213CH_osa_2978170.000000065836
Oryza sativa ssp. japonica413CH_osa_7966180.000586262
Oryza sativa ssp. japonica613CH_osa_331670.000000241141
Oryza sativa ssp. japonica713CH_osa_2618150.0000000177141
Oryza sativa ssp. japonica813CH_osa_592570.0000781415
Oryza sativa ssp. japonica1114CH_osa_61211350.00000000000000303127
Oryza sativa ssp. japonica1114CH_osa_41241113.47592e-21
Oryza sativa ssp. japonica1114CH_osa_87161180.00000000130888
Oryza sativa ssp. japonica1114CH_osa_54251803.45149e-17
Oryza sativa ssp. japonica1114CH_osa_142162820.000691535
Oryza sativa ssp. japonica1214CH_osa_140162800.000625681
Oryza sativa ssp. japonica1214CH_osa_11810560.00000589748
Oryza sativa ssp. japonica1115CH_osa_617400.000102905
Oryza sativa ssp. japonica1115CH_osa_127130.000000010719
Oryza sativa ssp. japonica1215CH_osa_456170.0000144648
Oryza sativa ssp. japonica1116CH_osa_28101040.0000150653
Populus trichocarpaChr0113CH_ptr_6018386.48674e-20
Populus trichocarpaChr0113CH_ptr_7136140.00046649
Populus trichocarpaChr0113CH_ptr_9120794.90662e-16
Populus trichocarpaChr0513CH_ptr_7428360.000595585
Populus trichocarpaChr1213CH_ptr_13311170.000000000000615952
Populus trichocarpaChr1413CH_ptr_19316780.00000000013275
Populus trichocarpaChr1713CH_ptr_10313230.00000000000000847426
Populus trichocarpaChr1713CH_ptr_74710680.000637054
Populus trichocarpaChr1813CH_ptr_4269300.00000382165
Populus trichocarpaChr1913CH_ptr_6476130.000269485
Populus trichocarpascaffold_2513CH_ptr_4920458.75827e-22
Populus trichocarpascaffold_4213CH_ptr_3478160.000000317184
Populus trichocarpaChr0114CH_ptr_21462741.31566e-32
Populus trichocarpaChr1214CH_ptr_7911170.000000000000615952
Populus trichocarpaChr1414CH_ptr_68221022.59821e-16
Populus trichocarpaChr1714CH_ptr_52342381.05124e-20
Populus trichocarpascaffold_2514CH_ptr_4820458.75827e-22
Setaria italicascaffold_213CH_sit_2819433.43347e-21
Setaria italicascaffold_513CH_sit_579570.000163931
Setaria italicascaffold_613CH_sit_21312470.00000000802929
Setaria italicascaffold_813CH_sit_3820591.14986e-19
Setaria italicascaffold_813CH_sit_29912620.00000028289
Setaria italicascaffold_813CH_sit_19514710.00000000382823
Setaria italicascaffold_813CH_sit_744440.000680481
Setaria italicascaffold_813CH_sit_7519790.00000000000000256958
Setaria italicascaffold_813CH_sit_30413800.000000394073
Setaria italicascaffold_813CH_sit_14416800.0000000000516077
Setaria italicascaffold_214CH_sit_2619433.43347e-21
Setaria italicascaffold_614CH_sit_5012470.00000000802929
Setaria italicascaffold_814CH_sit_45272960.0000000000107548
Setaria italicascaffold_814CH_sit_14351681.13121e-28
Setaria italicascaffold_814CH_sit_39302697.71423e-16
Setaria italicascaffold_814CH_sit_15402481.2134e-28
Setaria italicascaffold_815CH_sit_57160.000000154585
Setaria italicascaffold_816CH_sit_2132360.000173181
Setaria italicascaffold_816CH_sit_1182640.00000000482556
Solanum lycopersicumch0413CH_sly_372560.00000418715
Solanum lycopersicumch0413CH_sly_120890.0000000000022893
Solanum lycopersicumch0413CH_sly_5913234.71224e-18
Solanum lycopersicumch0613CH_sly_3506110.00000225581
Solanum lycopersicumch0713CH_sly_373560.00000418715
Solanum lycopersicumch0913CH_sly_555440.0000974962
Solanum lycopersicumch1013CH_sly_4157240.0000111922
Solanum lycopersicumch0414CH_sly_29292668.42832e-21
Solanum lycopersicumch0415CH_sly_137210.000000372761
Solanum lycopersicumch0615CH_sly_126110.000000303672
Solanum lycopersicumch0715CH_sly_47460.000381116
Solanum lycopersicumch0416CH_sly_2162630.0000000302276
Sorghum bicolorchr_213CH_sbi_587440.000282839
Sorghum bicolorchr_213CH_sbi_3139350.00000117282
Sorghum bicolorchr_213CH_sbi_10410160.00000000000146489
Sorghum bicolorchr_513CH_sbi_4014231.05872e-18
Sorghum bicolorchr_513CH_sbi_3626100.00000512028
Sorghum bicolorchr_513CH_sbi_3219541.18933e-20
Sorghum bicolorchr_513CH_sbi_20713760.000000013535
Sorghum bicolorchr_513CH_sbi_12711280.0000000000331696
Sorghum bicolorchr_713CH_sbi_146770.000000000236585
Sorghum bicolorscaffold_1913CH_sbi_588440.000282839
Sorghum bicolorchr_214CH_sbi_4510160.00000000000146489
Sorghum bicolorchr_514CH_sbi_5011280.0000000000331696
Sorghum bicolorchr_514CH_sbi_3514231.05872e-18
Sorghum bicolorchr_514CH_sbi_5413760.000000013535
Sorghum bicolorchr_514CH_sbi_3119541.18933e-20
Sorghum bicolorchr_714CH_sbi_6810660.0000252472
Sorghum bicolorchr_516CH_sbi_2132960.000616614
Vitis viniferachr1013CH_vvi_640440.00051373
Vitis viniferachr1213CH_vvi_14415690.0000000000768699
Vitis viniferachr1313CH_vvi_3723742.77921e-22
Vitis viniferachr1413CH_vvi_2219210.0000000282458
Vitis viniferachr1513CH_vvi_3517140.00000260153
Vitis viniferachr1913CH_vvi_23412560.0000000576025
Vitis viniferachr313CH_vvi_239660.0000000700599
Vitis viniferachr513CH_vvi_4277190.0000362934
Vitis viniferachr713CH_vvi_383550.00000600888
Vitis viniferachr1214CH_vvi_56282880.000000000000332257
Vitis viniferachr1314CH_vvi_22392241.73206e-29
Vitis viniferachr13_random14CH_vvi_79141180.00000367053
Vitis viniferachr1414CH_vvi_73212840.00000087052
Vitis viniferachr1914CH_vvi_7012560.0000000576025
Vitis viniferachr515CH_vvi_87190.0000000763237
Zea mays1013CH_zma_1117696.63154e-23
Zea mays1013CH_zma_277450.0000244374
Zea mays413CH_zma_2445110.00000728113
Zea mays413CH_zma_2317430.00000487028
Zea mays513CH_zma_166570.000000334597
Zea mays713CH_zma_1606150.000000253678
Zea mays1014CH_zma_917696.63154e-23
Zea mays315CH_zma_18330.000416336

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V