Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR000639
- Description
- Epoxide hydrolase-like
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Oryza sativa ssp. indica | Chr01 | 13 | CH_osaindica_428 | 3 | 3 | 0.00000158934 |
Oryza sativa ssp. indica | Chr10 | 13 | CH_osaindica_140 | 5 | 6 | 0.000000000000649981 |
Oryza sativa ssp. japonica | 10 | 13 | CH_osa_245 | 4 | 6 | 0.0000000079206 |
Populus trichocarpa | Chr10 | 13 | CH_ptr_499 | 3 | 3 | 0.0000265641 |
Populus trichocarpa | Chr13 | 13 | CH_ptr_572 | 3 | 4 | 0.000106188 |
Populus trichocarpa | scaffold_32 | 13 | CH_ptr_573 | 3 | 4 | 0.000106188 |
Setaria italica | scaffold_9 | 13 | CH_sit_290 | 4 | 7 | 0.000000237636 |
Setaria italica | scaffold_9 | 13 | CH_sit_554 | 3 | 6 | 0.000109539 |
Solanum lycopersicum | ch01 | 13 | CH_sly_383 | 3 | 3 | 0.0000056291 |
Solanum lycopersicum | ch05 | 13 | CH_sly_382 | 3 | 3 | 0.0000056291 |
Solanum lycopersicum | ch05 | 13 | CH_sly_444 | 3 | 4 | 0.0000225075 |
Vitis vinifera | chr12 | 13 | CH_vvi_401 | 3 | 3 | 0.0000130673 |
Vitis vinifera | chr5 | 13 | CH_vvi_202 | 4 | 4 | 0.00000000933731 |
Zea mays | 5 | 13 | CH_zma_271 | 3 | 5 | 0.0000201766 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |