PLAZA 3.0 Dicots : MapMan information

MapMan term

16.2.1

Description MapMan term

secondary metabolism.phenylpropanoids.lignin biosynthesis

#associated genes

1123

#associated gene families

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Gene family	#genes (in total)	#associated genes	species	aly	ath	atr	bra	bvu	cla	cme	cpa	cre	cru	csi	egr	fve	gma	gra	lja	mdo	mes	mtr	olu	osa	ppa	ppe	ptr	rco	sly	stu	tca	tpa	vvi	zma
HOM03D000203	506	347	31	9	9	9	11	6	7	6	15	4	8	7	52	20	18	15	5	58	20	20	3	12	3	40	26	10	17	29	15	9	35	8
HOM03D000189	546	300	30	12	15	23	24	9	20	14	17	0	15	21	27	12	34	19	9	49	21	25	1	15	12	16	27	14	15	13	16	17	15	19
HOM03D000437	287	187	31	7	7	7	11	6	7	3	5	2	6	9	20	12	15	9	3	24	11	12	1	6	2	6	7	9	30	16	9	7	12	6
HOM03D000589	229	153	29	4	4	5	8	1	12	14	5	0	3	4	9	2	8	8	10	10	6	7	0	10	23	2	5	7	16	8	3	3	17	15
HOM03D000090	1046	38	30	19	17	20	36	26	16	24	10	3	16	73	89	20	58	49	19	95	38	66	0	43	4	21	42	46	25	53	24	22	43	29
HOM03D002815	65	35	22	0	0	3	0	2	2	4	3	0	0	2	4	2	6	2	0	5	2	3	0	5	0	2	3	3	3	2	2	0	2	3
HOM03D000085	1067	21	30	22	24	31	35	22	23	11	24	8	23	31	56	28	55	37	19	110	41	40	0	54	9	39	58	31	30	37	34	23	68	44
HOM03D000087	1060	12	30	21	19	43	37	26	18	16	22	0	20	25	65	27	69	44	17	64	33	69	1	86	14	32	49	30	26	25	41	20	26	75
HOM03D000004	5122	7	31	133	145	142	199	87	118	119	92	4	136	213	293	157	244	210	82	370	188	268	1	191	60	182	218	166	139	386	171	115	164	129
HOM03D000099	1002	6	29	26	25	17	36	18	15	18	20	0	25	26	92	36	59	31	13	78	32	80	0	53	4	36	70	14	24	30	35	21	27	41
HOM03D000237	447	6	31	10	15	6	15	14	11	11	10	3	16	15	21	13	26	15	5	27	12	17	3	12	5	13	29	25	26	26	12	11	10	13
HOM03D000445	283	1	31	8	7	9	11	6	7	8	5	3	7	6	10	8	19	16	3	31	10	13	3	5	13	8	9	6	7	15	7	6	10	7
HOM03D002172	79	1	27	2	2	1	2	2	2	2	3	0	2	2	3	2	8	3	0	6	4	4	0	6	0	2	3	2	3	3	2	2	4	2
HOM03D003487	52	1	29	1	1	1	2	1	1	1	1	1	1	1	3	1	4	1	2	6	1	9	0	1	0	1	3	1	1	1	1	1	2	1
HOM03D004905	41	1	30	1	1	1	1	1	1	1	2	1	1	1	1	1	1	1	0	1	1	1	2	1	1	1	1	9	1	1	1	2	1	1
HOM03D004957	41	1	31	1	1	1	2	1	2	1	3	1	1	1	1	2	2	1	1	2	2	1	1	1	1	1	2	1	1	1	1	1	1	2
HOM03D010152	7	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7
HOM03D042669	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
HOM03D114541	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
HOM03D116364	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0

#genes (in total)

This is the number of genes in the entire gene family.

#associated genes

This is the number of genes that are part of the gene family, and also have the specified MapMan term. Naturaly, this number should be a subset of "#genes (in total)".

Gene families associated with a MapMan term

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