Gene families associated with InterPro domain IPR006145
All gene family content
is shown and individual cells refer to the target genes (per species).
- InterPro domain
- IPR006145
- InterPro domain description
- Pseudouridine synthase, RsuA/RluB/C/D/E/F
- #associated genes
- 288
- #associated gene families
- 10
Click table-header(s) to enable sorting
Gene family | #genes (in total) | #associated genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HOM03D002440 | 73 | 65 | 31 | 2 | 2 | 2 | 2 | 4 | 3 | 2 | 4 | 1 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 3 | 5 | 3 | 2 | 3 | 1 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 |
HOM03D004178 | 46 | 42 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 7 | 1 | 1 | 1 | 0 | 5 | 1 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 |
HOM03D004374 | 45 | 42 | 31 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 6 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 |
HOM03D005050 | 41 | 36 | 30 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 3 | 1 | 1 | 4 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 |
HOM03D006431 | 34 | 32 | 25 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 1 | 1 | 5 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 |
HOM03D006623 | 33 | 32 | 28 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 |
HOM03D007007 | 31 | 30 | 29 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
HOM03D000056 | 1395 | 2 | 31 | 53 | 46 | 21 | 84 | 28 | 29 | 31 | 33 | 48 | 48 | 43 | 46 | 31 | 88 | 59 | 18 | 88 | 56 | 46 | 16 | 42 | 36 | 28 | 55 | 34 | 54 | 49 | 31 | 43 | 32 | 79 |
HOM03D000682 | 203 | 1 | 31 | 3 | 3 | 3 | 6 | 5 | 4 | 3 | 6 | 1 | 3 | 4 | 17 | 4 | 12 | 10 | 2 | 28 | 7 | 2 | 3 | 7 | 6 | 4 | 13 | 4 | 7 | 9 | 4 | 3 | 8 | 12 |
HOM03D002183 | 79 | 1 | 29 | 2 | 2 | 2 | 5 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 3 | 0 | 6 | 4 | 3 | 0 | 3 | 3 | 2 | 3 | 2 | 2 | 5 | 2 | 2 | 2 | 4 |
- #genes (in total)
- This is the number of genes in the entire gene family.
- #associated genes
- This is the number of genes that are part of the gene family, and also have the specified InterPro domain. Naturaly, this number should be a subset of "#genes (in total)".