Child GO terms
- Original GO term
- GO:0044265
- Description
- cellular macromolecule catabolic process
- Type
- BP
GO | description | genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0044257 | cellular protein catabolic process | 9993 | 31 | 897 | 888 | 159 | 829 | 190 | 172 | 180 | 201 | 107 | 772 | 195 | 250 | 265 | 401 | 331 | 124 | 478 | 258 | 373 | 87 | 283 | 211 | 218 | 303 | 184 | 276 | 360 | 193 | 311 | 208 | 289 |
GO:0051603 | proteolysis involved in cellular protein catabolic process | 9756 | 31 | 890 | 859 | 154 | 818 | 184 | 165 | 173 | 195 | 102 | 765 | 188 | 243 | 258 | 390 | 322 | 120 | 471 | 250 | 367 | 84 | 276 | 204 | 212 | 294 | 177 | 269 | 353 | 186 | 304 | 202 | 281 |
GO:0019941 | modification-dependent protein catabolic process | 9352 | 31 | 872 | 775 | 148 | 793 | 178 | 159 | 163 | 187 | 98 | 758 | 182 | 235 | 230 | 374 | 307 | 116 | 436 | 242 | 357 | 81 | 269 | 189 | 205 | 285 | 169 | 262 | 342 | 180 | 296 | 196 | 268 |
GO:0043632 | modification-dependent macromolecule catabolic process | 9352 | 31 | 872 | 775 | 148 | 793 | 178 | 159 | 163 | 187 | 98 | 758 | 182 | 235 | 230 | 374 | 307 | 116 | 436 | 242 | 357 | 81 | 269 | 189 | 205 | 285 | 169 | 262 | 342 | 180 | 296 | 196 | 268 |
GO:0006511 | ubiquitin-dependent protein catabolic process | 9283 | 31 | 870 | 769 | 146 | 791 | 176 | 157 | 161 | 185 | 96 | 756 | 180 | 233 | 228 | 371 | 305 | 114 | 434 | 239 | 355 | 81 | 267 | 186 | 203 | 282 | 167 | 260 | 340 | 178 | 294 | 194 | 265 |
GO:0006401 | RNA catabolic process | 1182 | 31 | 36 | 136 | 27 | 52 | 34 | 28 | 29 | 27 | 35 | 35 | 29 | 27 | 27 | 63 | 48 | 17 | 57 | 33 | 33 | 19 | 41 | 36 | 30 | 46 | 28 | 37 | 36 | 29 | 36 | 32 | 39 |
GO:0010498 | proteasomal protein catabolic process | 1132 | 31 | 31 | 223 | 22 | 41 | 29 | 24 | 26 | 25 | 10 | 29 | 24 | 33 | 26 | 63 | 48 | 17 | 56 | 36 | 33 | 13 | 32 | 24 | 25 | 45 | 25 | 27 | 28 | 25 | 28 | 24 | 40 |
GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | 1013 | 31 | 30 | 139 | 21 | 40 | 28 | 23 | 25 | 24 | 10 | 28 | 23 | 32 | 25 | 59 | 47 | 16 | 53 | 34 | 32 | 13 | 31 | 23 | 24 | 43 | 24 | 26 | 27 | 24 | 27 | 23 | 39 |
GO:0006402 | mRNA catabolic process | 869 | 31 | 20 | 121 | 18 | 39 | 23 | 21 | 22 | 21 | 17 | 21 | 21 | 18 | 20 | 48 | 35 | 10 | 45 | 24 | 23 | 16 | 26 | 30 | 22 | 34 | 20 | 29 | 28 | 20 | 24 | 24 | 29 |
GO:0000956 | nuclear-transcribed mRNA catabolic process | 787 | 31 | 18 | 119 | 16 | 34 | 20 | 18 | 19 | 17 | 16 | 19 | 19 | 16 | 18 | 44 | 33 | 9 | 38 | 22 | 21 | 14 | 24 | 27 | 19 | 31 | 18 | 26 | 25 | 18 | 20 | 22 | 27 |
GO:0034661 | ncRNA catabolic process | 364 | 31 | 15 | 15 | 10 | 16 | 12 | 8 | 9 | 7 | 20 | 15 | 9 | 9 | 10 | 22 | 15 | 8 | 16 | 9 | 10 | 5 | 16 | 7 | 9 | 15 | 11 | 10 | 10 | 10 | 12 | 11 | 13 |
GO:0031087 | deadenylation-independent decapping of nuclear-transcribed mRNA | 266 | 31 | 5 | 9 | 6 | 13 | 6 | 8 | 9 | 6 | 6 | 7 | 7 | 6 | 8 | 18 | 10 | 5 | 13 | 8 | 6 | 7 | 10 | 13 | 8 | 12 | 7 | 9 | 10 | 6 | 7 | 9 | 12 |
GO:0031086 | nuclear-transcribed mRNA catabolic process, deadenylation-independent decay | 266 | 31 | 5 | 9 | 6 | 13 | 6 | 8 | 9 | 6 | 6 | 7 | 7 | 6 | 8 | 18 | 10 | 5 | 13 | 8 | 6 | 7 | 10 | 13 | 8 | 12 | 7 | 9 | 10 | 6 | 7 | 9 | 12 |
GO:0006308 | DNA catabolic process | 260 | 31 | 9 | 10 | 6 | 11 | 6 | 7 | 7 | 7 | 1 | 10 | 8 | 9 | 8 | 16 | 12 | 6 | 16 | 9 | 13 | 1 | 8 | 5 | 9 | 9 | 9 | 7 | 7 | 10 | 8 | 7 | 9 |
GO:0010304 | PSII associated light-harvesting complex II catabolic process | 237 | 31 | 7 | 29 | 5 | 11 | 6 | 7 | 7 | 6 | 5 | 7 | 7 | 7 | 7 | 11 | 9 | 4 | 7 | 8 | 6 | 3 | 7 | 7 | 6 | 9 | 7 | 7 | 7 | 7 | 7 | 6 | 8 |
GO:0030433 | ER-associated ubiquitin-dependent protein catabolic process | 228 | 31 | 7 | 8 | 6 | 11 | 7 | 5 | 6 | 5 | 4 | 7 | 6 | 7 | 5 | 13 | 10 | 5 | 10 | 9 | 7 | 6 | 6 | 8 | 6 | 13 | 6 | 8 | 8 | 6 | 8 | 6 | 9 |
GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 228 | 30 | 8 | 8 | 5 | 9 | 5 | 5 | 5 | 6 | 1 | 8 | 6 | 6 | 7 | 20 | 16 | 4 | 15 | 7 | 10 | 0 | 9 | 3 | 6 | 12 | 6 | 6 | 6 | 6 | 6 | 5 | 12 |
GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 219 | 31 | 5 | 12 | 5 | 8 | 9 | 5 | 5 | 5 | 5 | 4 | 6 | 6 | 5 | 13 | 12 | 3 | 12 | 7 | 7 | 3 | 8 | 8 | 6 | 10 | 6 | 8 | 10 | 6 | 4 | 7 | 9 |
GO:0016075 | rRNA catabolic process | 186 | 31 | 9 | 7 | 6 | 8 | 7 | 4 | 4 | 3 | 16 | 7 | 5 | 5 | 4 | 11 | 6 | 4 | 7 | 5 | 6 | 1 | 10 | 3 | 4 | 7 | 6 | 5 | 5 | 5 | 5 | 5 | 6 |
GO:0010587 | miRNA catabolic process | 178 | 31 | 6 | 8 | 4 | 8 | 5 | 4 | 5 | 4 | 4 | 8 | 4 | 4 | 6 | 11 | 9 | 4 | 9 | 4 | 4 | 4 | 6 | 4 | 5 | 8 | 5 | 5 | 5 | 5 | 7 | 6 | 7 |
GO:0000288 | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 174 | 31 | 7 | 6 | 4 | 12 | 4 | 4 | 4 | 5 | 4 | 7 | 5 | 3 | 4 | 11 | 10 | 1 | 11 | 6 | 6 | 3 | 5 | 5 | 4 | 7 | 4 | 5 | 4 | 5 | 8 | 5 | 5 |
GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | 172 | 31 | 7 | 6 | 4 | 12 | 4 | 4 | 4 | 5 | 3 | 7 | 5 | 3 | 4 | 11 | 10 | 1 | 11 | 6 | 6 | 2 | 5 | 5 | 4 | 7 | 4 | 5 | 4 | 5 | 8 | 5 | 5 |
GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening | 134 | 31 | 5 | 4 | 2 | 10 | 3 | 3 | 3 | 4 | 2 | 5 | 4 | 2 | 3 | 9 | 8 | 1 | 10 | 5 | 6 | 1 | 4 | 4 | 3 | 6 | 3 | 3 | 3 | 4 | 5 | 4 | 5 |
GO:1900151 | regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 134 | 31 | 5 | 4 | 2 | 10 | 3 | 3 | 3 | 4 | 2 | 5 | 4 | 2 | 3 | 9 | 8 | 1 | 10 | 5 | 6 | 1 | 4 | 4 | 3 | 6 | 3 | 3 | 3 | 4 | 5 | 4 | 5 |
GO:0061013 | regulation of mRNA catabolic process | 134 | 31 | 5 | 4 | 2 | 10 | 3 | 3 | 3 | 4 | 2 | 5 | 4 | 2 | 3 | 9 | 8 | 1 | 10 | 5 | 6 | 1 | 4 | 4 | 3 | 6 | 3 | 3 | 3 | 4 | 5 | 4 | 5 |
GO:0000291 | nuclear-transcribed mRNA catabolic process, exonucleolytic | 130 | 31 | 2 | 4 | 3 | 5 | 4 | 3 | 4 | 3 | 3 | 4 | 3 | 3 | 5 | 10 | 6 | 2 | 8 | 3 | 4 | 3 | 4 | 3 | 4 | 7 | 5 | 4 | 4 | 4 | 3 | 5 | 5 |
GO:0006515 | misfolded or incompletely synthesized protein catabolic process | 117 | 31 | 7 | 5 | 2 | 9 | 3 | 2 | 4 | 3 | 1 | 3 | 2 | 2 | 3 | 7 | 5 | 1 | 10 | 2 | 6 | 2 | 4 | 5 | 3 | 4 | 3 | 4 | 3 | 2 | 3 | 2 | 5 |
GO:0031145 | anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | 104 | 31 | 3 | 4 | 3 | 3 | 5 | 3 | 4 | 5 | 1 | 3 | 2 | 12 | 4 | 4 | 2 | 1 | 8 | 3 | 3 | 1 | 3 | 2 | 2 | 3 | 2 | 2 | 2 | 3 | 3 | 3 | 5 |
GO:0000738 | DNA catabolic process, exonucleolytic | 101 | 31 | 2 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 1 | 3 | 4 | 3 | 4 | 6 | 3 | 2 | 7 | 4 | 4 | 1 | 3 | 2 | 4 | 4 | 4 | 3 | 3 | 4 | 3 | 3 | 3 |
GO:0032434 | regulation of proteasomal ubiquitin-dependent protein catabolic process | 86 | 31 | 3 | 3 | 2 | 4 | 3 | 2 | 2 | 3 | 1 | 3 | 2 | 2 | 3 | 7 | 3 | 3 | 3 | 4 | 3 | 1 | 3 | 1 | 2 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 4 |
GO:0061136 | regulation of proteasomal protein catabolic process | 86 | 31 | 3 | 3 | 2 | 4 | 3 | 2 | 2 | 3 | 1 | 3 | 2 | 2 | 3 | 7 | 3 | 3 | 3 | 4 | 3 | 1 | 3 | 1 | 2 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 4 |
GO:0000729 | DNA double-strand break processing | 66 | 31 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 5 | 3 | 3 | 1 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
GO:0000706 | meiotic DNA double-strand break processing | 66 | 31 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 5 | 3 | 3 | 1 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
GO:1901799 | negative regulation of proteasomal protein catabolic process | 48 | 28 | 2 | 2 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 2 | 1 | 1 | 3 | 3 | 1 | 1 | 2 | 2 | 2 | 0 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 4 |
GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process | 48 | 28 | 2 | 2 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 2 | 1 | 1 | 3 | 3 | 1 | 1 | 2 | 2 | 2 | 0 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 4 |
GO:0060564 | negative regulation of mitotic anaphase-promoting complex activity | 48 | 28 | 2 | 2 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 2 | 1 | 1 | 3 | 3 | 1 | 1 | 2 | 2 | 2 | 0 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 4 |
GO:0016598 | protein arginylation | 45 | 29 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 6 | 1 | 2 | 1 | 0 | 3 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 |
GO:1901483 | regulation of transcription factor catabolic process | 38 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 4 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 0 |
GO:1901485 | positive regulation of transcription factor catabolic process | 38 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 4 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 0 |
GO:1901800 | positive regulation of proteasomal protein catabolic process | 38 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 4 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 0 |
GO:0036369 | transcription factor catabolic process | 38 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 4 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 0 |
GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 38 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 4 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 0 |
GO:0006516 | glycoprotein catabolic process | 33 | 27 | 1 | 4 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 |
GO:0030327 | prenylated protein catabolic process | 32 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0000957 | mitochondrial RNA catabolic process | 30 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 24 | 4 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 |
GO:0070407 | oxidation-dependent protein catabolic process | 5 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
GO:0043137 | DNA replication, removal of RNA primer | 3 | 3 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |