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Gene
GO/InterPro/MapMan description
Binding site description/sequence
Gene family
GO ID
MapMan ID
TF family
All species
Amborella trichopoda
Arabidopsis lyrata
Arabidopsis thaliana
Beta vulgaris
Brassica rapa
Capsella rubella
Carica papaya
Chlamydomonas reinhardtii
Citrullus lanatus
Citrus sinensis
Cucumis melo
Eucalyptus grandis
Fragaria vesca
Glycine max
Gossypium raimondii
Lotus japonicus
Malus domestica
Manihot esculenta
Medicago truncatula
Oryza sativa ssp. japonica
Ostreococcus lucimarinus
Physcomitrella patens
Populus trichocarpa
Prunus persica
Ricinus communis
Solanum lycopersicum
Solanum tuberosum
Thellungiella parvula
Theobroma cacao
Vitis vinifera
Zea mays
Dicots PLAZA 3.0
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Active versions
pico-PLAZA 2.0
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Parental GO terms
Original GO term
GO:0030422
Description
production of siRNA involved in RNA interference
Type
BP
GO
description
genes
species
aly
ath
atr
bra
bvu
cla
cme
cpa
cre
cru
csi
egr
fve
gma
gra
lja
mdo
mes
mtr
olu
osa
ppa
ppe
ptr
rco
sly
stu
tca
tpa
vvi
zma
GO:0008150
biological_process
522964
31
17841
19965
11480
23537
12932
11911
12662
12868
6903
16300
14644
20129
15004
30507
21275
8644
34226
17438
22816
4298
21456
13432
15519
22457
14970
18532
19742
14915
14166
14433
17962
GO:0008152
metabolic process
380570
31
12695
15341
8369
16593
9448
8544
9139
9579
5457
11464
10321
14197
11003
21913
15373
6374
24591
12366
15681
3427
17139
9974
11429
16107
11047
13881
14206
11080
9948
10524
13360
GO:0009987
cellular process
379541
31
13096
16255
7888
17477
9606
8617
9270
9605
5574
12080
10473
13888
10618
22379
15819
6421
24347
12471
15494
3463
15867
10369
10643
16560
10498
13124
13357
10777
10458
10043
13004
GO:0071704
organic substance metabolic process
317683
31
10887
14031
6650
14294
7868
7160
7686
8063
4666
9846
8362
11402
9161
18364
12774
5363
20108
10351
12855
2891
14791
8352
9534
13277
8892
11485
11196
9274
8578
8453
11069
GO:0044238
primary metabolic process
298650
31
10221
13115
6236
13371
7366
6696
7214
7597
4274
9229
7907
10568
8571
17310
11983
5024
18890
9711
12096
2741
14299
7865
9004
12477
8329
10852
10492
8755
8023
7925
10509
GO:0044699
single-organism process
298378
31
10414
14009
6548
13911
7681
7022
7227
7393
3937
10111
8390
11377
8431
17875
12452
4992
18872
9906
12919
2574
8787
7848
8444
13115
8510
10178
10881
8032
8589
8251
9702
GO:0044237
cellular metabolic process
285282
31
9727
13058
5856
12954
7195
6389
6936
7309
4455
8923
7425
10086
7930
16458
11754
4882
18014
9260
11455
2752
13344
7804
7707
12076
7950
9971
10071
8321
7711
7528
9981
GO:0043170
macromolecule metabolic process
228775
31
7940
10413
4620
10260
5533
4957
5418
5829
3266
7179
5987
7997
6618
13142
9157
3806
14056
7244
9346
2071
12164
5792
7107
9424
6225
8524
7903
6870
6086
5844
7997
GO:0044763
single-organism cellular process
220378
31
7637
11258
4691
10225
5808
5204
5415
5544
3016
7306
6212
8218
6224
13318
9322
3732
13885
7299
8876
2067
6384
6098
6249
9870
6168
7393
7592
5866
6382
5993
7126
GO:0044260
cellular macromolecule metabolic process
205694
31
7116
9643
4053
9350
5036
4481
4915
5303
2985
6535
5369
7220
5777
11927
8386
3466
12778
6575
8363
1860
10892
5306
5621
8624
5640
7223
7155
6217
5487
5199
7192
GO:0050896
response to stimulus
158325
31
6136
8646
3205
8087
3969
3743
3835
3575
1714
6115
4639
6644
4305
9177
6596
2683
8928
5418
6893
1151
4502
3815
4489
6891
4153
5171
5899
4427
4915
4187
4417
GO:0044710
single-organism metabolic process
146472
31
4540
7455
3391
6113
3840
3395
3524
3614
2222
4428
3935
5565
4193
8583
6073
2485
9465
4677
6022
1497
4608
4116
4006
6281
4397
5159
5728
4097
3845
4280
4938
GO:0006807
nitrogen compound metabolic process
141802
31
4647
6770
2845
6246
3701
3272
3577
3980
2413
4406
3451
4159
3971
8204
5703
2631
8060
4415
5506
1438
8362
3765
3848
5605
4214
5130
4781
4477
3918
3517
4790
GO:1901360
organic cyclic compound metabolic process
136666
31
4421
6756
2636
5977
3507
3115
3408
3809
2225
4286
3307
4157
3876
7936
5584
2528
7631
4230
5357
1326
8144
3444
3713
5534
4000
4996
4706
4432
3756
3383
4486
GO:0006725
cellular aromatic compound metabolic process
131945
31
4302
6469
2557
5774
3404
3019
3298
3699
2157
4092
3169
3904
3730
7647
5363
2457
7359
4102
5213
1286
8067
3363
3618
5267
3857
4807
4443
4256
3634
3251
4381
GO:0065007
biological regulation
131146
31
5116
7543
2527
6771
3115
3131
3173
3530
1263
4854
3507
4777
3555
8019
5646
2229
7693
4427
5584
861
3687
3151
3575
5564
3827
4584
4569
3369
4076
3243
4180
GO:0034641
cellular nitrogen compound metabolic process
128361
31
4213
6200
2519
5662
3341
2923
3209
3646
2013
4010
3081
3680
3597
7459
5176
2386
7174
3992
5045
1284
7956
3291
3510
5096
3800
4696
4328
4132
3554
3094
4294
GO:0046483
heterocycle metabolic process
128029
31
4178
6160
2496
5609
3324
2920
3216
3632
2015
3967
3082
3684
3603
7450
5178
2371
7176
3986
5038
1290
7954
3284
3505
5089
3784
4679
4310
4134
3527
3098
4290
GO:0050789
regulation of biological process
120632
31
4615
6709
2348
6264
2899
2919
2947
3315
1140
4364
3255
4402
3293
7297
5279
2044
7202
4148
4942
785
3379
2930
3321
5206
3591
4175
4132
3107
3708
2985
3931
GO:0006139
nucleobase-containing compound metabolic process
117990
31
3821
5640
2258
5132
3052
2644
2932
3363
1822
3642
2823
3320
3325
6922
4822
2183
6540
3656
4694
1136
7678
2980
3243
4704
3472
4379
3959
3852
3214
2825
3957
GO:0090304
nucleic acid metabolic process
102500
31
3321
4852
1928
4422
2591
2296
2562
2922
1443
3178
2417
2834
2931
5999
4112
1963
5525
3145
4174
930
7209
2474
2852
4026
2968
3862
3455
3486
2817
2427
3379
GO:0010467
gene expression
97737
31
3490
5407
1985
4799
2565
2344
2433
2902
953
3152
2472
2865
2727
5896
4434
1614
5858
3253
3716
920
2968
2715
2615
4171
2910
3694
3379
2517
2826
2476
3681
GO:0016070
RNA metabolic process
77842
31
2811
4262
1541
3833
2066
1896
1939
2430
724
2606
1999
2328
2173
4794
3498
1299
4512
2646
2928
655
2318
1930
2147
3345
2418
2990
2623
2048
2321
1958
2804
GO:0019222
regulation of metabolic process
73944
31
2728
4042
1451
3825
1886
1804
1832
2294
525
2565
1925
2251
1989
4628
3377
1265
4115
2593
2868
464
2246
1737
2023
3200
2387
2754
2529
1931
2297
1838
2575
GO:0042221
response to chemical
72733
31
2996
4941
1494
4078
1855
1889
1880
1686
641
3040
1924
2898
1915
4165
3226
1361
3432
2620
2746
510
1776
1637
1991
3040
1838
2338
2555
2101
2407
1851
1902
GO:0060255
regulation of macromolecule metabolic process
64244
31
2363
3388
1193
3377
1651
1578
1588
2039
429
2247
1672
1910
1739
4099
2999
1072
3534
2275
2417
384
1975
1497
1769
2828
2129
2416
2155
1679
1998
1553
2291
GO:0010468
regulation of gene expression
61022
31
2250
3165
1121
3224
1535
1503
1507
1915
376
2146
1576
1818
1647
3939
2880
1025
3356
2175
2332
337
1861
1417
1681
2704
2007
2313
2059
1596
1889
1471
2197
GO:0051716
cellular response to stimulus
60750
31
2276
4004
1136
2917
1415
1404
1432
1399
802
2306
1719
2628
1692
3634
2565
1022
3555
1966
2714
478
1540
1573
1711
2630
1691
1929
2061
1609
1806
1517
1619
GO:0010033
response to organic substance
48856
31
2161
3709
933
2912
1214
1250
1253
1110
342
2228
1272
1940
1264
2794
2219
888
2262
1746
1819
249
1113
962
1269
2006
1172
1559
1755
1386
1656
1192
1221
GO:0070887
cellular response to chemical stimulus
23771
31
988
2063
464
1303
608
636
625
551
178
967
636
904
665
1271
1019
443
1085
874
760
127
622
476
646
1012
611
781
850
673
764
564
605
GO:0048519
negative regulation of biological process
19624
31
829
1532
425
1036
527
508
496
462
184
757
493
620
512
1111
818
381
887
683
763
147
565
465
527
790
521
653
675
522
628
505
602
GO:0071310
cellular response to organic substance
19047
31
820
1739
381
1068
481
498
498
440
142
808
505
663
537
1006
797
363
885
682
577
101
539
397
486
735
476
639
700
513
617
449
505
GO:0006396
RNA processing
14546
31
468
1104
370
540
480
354
370
412
267
423
359
445
434
755
517
250
875
415
511
279
429
404
407
574
379
577
501
377
378
391
501
GO:0014070
response to organic cyclic compound
11316
31
430
1061
202
609
282
268
275
239
69
475
325
580
314
616
486
204
571
391
437
47
211
184
309
453
264
387
457
320
364
255
231
GO:0009892
negative regulation of metabolic process
9914
31
343
781
227
451
301
261
261
238
98
321
270
287
288
554
415
200
461
336
388
80
319
242
275
403
294
316
327
274
316
265
322
GO:0010605
negative regulation of macromolecule metabolic process
8785
31
302
735
204
399
260
232
231
211
81
281
240
236
252
503
376
174
402
299
305
72
289
213
242
358
266
283
287
241
278
241
292
GO:1901698
response to nitrogen compound
8255
31
311
1009
158
463
200
202
199
195
55
380
204
310
210
410
405
157
338
282
248
32
184
154
205
309
200
229
267
241
282
209
207
GO:0010629
negative regulation of gene expression
7492
31
261
660
177
336
208
194
194
182
64
243
210
209
222
435
328
153
338
257
272
57
208
182
210
301
206
251
249
206
237
210
232
GO:0071407
cellular response to organic cyclic compound
5478
31
158
615
114
217
123
131
137
121
43
180
172
238
178
262
227
115
274
195
160
29
134
117
148
218
139
207
248
164
139
127
148
GO:0040029
regulation of gene expression, epigenetic
4825
31
141
534
120
177
149
117
122
115
58
136
140
137
143
274
192
100
194
154
185
63
135
127
139
179
132
158
156
123
132
145
148
GO:0010608
posttranscriptional regulation of gene expression
3983
31
106
423
94
151
136
101
100
92
47
108
101
124
112
209
172
75
168
128
123
44
172
109
104
167
126
116
119
103
104
103
146
GO:0016458
gene silencing
3945
31
111
483
100
138
121
94
94
89
36
107
114
113
127
217
158
86
163
127
159
29
111
100
110
150
104
136
132
105
110
106
115
GO:0031047
gene silencing by RNA
2964
31
76
400
81
95
93
64
69
66
25
78
84
81
97
162
118
64
117
99
115
20
88
71
78
113
79
103
102
78
80
81
87
GO:1901699
cellular response to nitrogen compound
2521
31
97
224
63
133
72
68
68
55
25
89
66
83
81
127
89
55
99
85
80
15
75
61
68
90
72
79
93
61
91
71
86
GO:0016441
posttranscriptional gene silencing
2119
31
55
268
58
74
60
53
56
51
25
56
63
72
68
106
83
42
83
68
65
19
64
55
64
82
56
67
65
56
54
64
67
GO:0035194
posttranscriptional gene silencing by RNA
1891
31
49
260
53
63
55
43
48
46
20
52
57
58
60
96
72
37
72
62
56
16
59
49
54
72
52
59
57
49
48
57
60
GO:0071359
cellular response to dsRNA
1445
31
39
150
43
47
44
33
38
33
13
39
44
45
52
81
51
35
57
46
49
9
49
36
43
55
39
52
59
36
36
43
49
GO:0070918
production of small RNA involved in gene silencing by RNA
1445
31
39
150
43
47
44
33
38
33
13
39
44
45
52
81
51
35
57
46
49
9
49
36
43
55
39
52
59
36
36
43
49
GO:0031050
dsRNA fragmentation
1445
31
39
150
43
47
44
33
38
33
13
39
44
45
52
81
51
35
57
46
49
9
49
36
43
55
39
52
59
36
36
43
49
GO:0043331
response to dsRNA
1445
31
39
150
43
47
44
33
38
33
13
39
44
45
52
81
51
35
57
46
49
9
49
36
43
55
39
52
59
36
36
43
49
GO:0016246
RNA interference
1208
31
32
187
34
37
32
27
30
31
11
32
35
37
39
56
44
26
42
36
33
7
43
31
35
42
31
41
38
31
32
35
41
Options
All GO data
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