Child GO terms

Original GO term
GO:0006396
Description
RNA processing
Type
BP

GO description genes species aly ath atr bra bvu cla cme cpa cre cru csi egr fve gma gra lja mdo mes mtr olu osa ppa ppe ptr rco sly stu tca tpa vvi zma
GO:0034470 ncRNA processing 5128 31 147 430 125 173 155 123 134 152 121 154 119 153 131 269 195 87 327 131 166 134 152 143 126 205 134 209 178 136 122 143 154
GO:0006397 mRNA processing 4279 31 139 279 117 176 153 104 108 117 72 132 107 139 128 233 159 67 244 129 149 71 130 142 114 177 110 150 143 109 116 119 146
GO:0008380 RNA splicing 3320 31 113 345 84 122 104 82 86 89 52 95 82 94 91 164 118 58 185 98 121 33 99 90 93 135 89 105 102 84 92 82 133
GO:0008033 tRNA processing 2787 31 85 80 65 100 79 67 73 73 67 86 66 92 70 164 124 50 177 72 106 85 83 85 64 119 78 137 116 84 72 80 88
GO:0006364 rRNA processing 2259 31 60 351 56 72 72 54 58 74 52 65 47 57 60 108 63 35 149 50 55 49 65 58 59 80 53 68 62 51 49 59 68
GO:0000375 RNA splicing, via transesterification reactions 2084 31 73 150 61 82 59 54 59 58 30 62 54 61 60 112 72 31 119 68 78 20 60 61 65 93 58 74 70 57 60 54 69
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2084 31 73 150 61 82 59 54 59 58 30 62 54 61 60 112 72 31 119 68 78 20 60 61 65 93 58 74 70 57 60 54 69
GO:0000398 mRNA splicing, via spliceosome 1786 31 62 139 50 73 49 43 49 47 30 53 44 48 50 94 62 28 107 59 66 20 51 56 54 82 49 64 59 46 49 44 59
GO:0031050 dsRNA fragmentation 1445 31 39 150 43 47 44 33 38 33 13 39 44 45 52 81 51 35 57 46 49 9 49 36 43 55 39 52 59 36 36 43 49
GO:0070918 production of small RNA involved in gene silencing by RNA 1445 31 39 150 43 47 44 33 38 33 13 39 44 45 52 81 51 35 57 46 49 9 49 36 43 55 39 52 59 36 36 43 49
GO:0030422 production of siRNA involved in RNA interference 1082 31 29 143 32 35 31 26 29 26 9 29 34 35 37 54 37 24 42 30 30 6 41 27 33 39 28 34 35 26 29 33 39
GO:0006400 tRNA modification 1041 31 33 29 27 36 34 29 33 32 29 29 27 30 27 68 48 17 73 30 33 35 31 30 27 45 31 28 34 35 26 27 28
GO:0031123 RNA 3'-end processing 989 31 29 34 22 47 27 25 24 29 23 30 27 30 35 53 44 18 71 31 32 17 36 25 26 37 23 36 35 30 32 28 33
GO:0035196 production of miRNAs involved in gene silencing by miRNA 770 31 19 136 23 24 21 16 22 17 7 21 20 24 23 40 24 16 26 22 21 5 26 15 19 31 20 24 24 16 17 21 30
GO:0010267 production of ta-siRNAs involved in RNA interference 640 31 15 111 21 17 18 15 16 14 6 16 20 20 21 33 22 13 23 15 16 3 25 11 18 25 15 20 21 14 14 19 23
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 475 31 14 144 7 12 10 7 9 9 11 10 7 13 11 18 19 10 25 8 14 6 9 8 8 14 12 11 9 7 10 8 15
GO:0043631 RNA polyadenylation 467 31 12 14 9 21 14 11 11 15 6 11 13 10 17 29 19 12 38 15 15 5 22 10 11 20 11 17 18 15 13 13 20
GO:0031124 mRNA 3'-end processing 464 31 15 15 11 26 12 12 12 15 8 14 12 11 13 32 21 8 34 16 14 5 14 13 11 22 11 15 16 13 15 13 15
GO:0000154 rRNA modification 367 31 7 77 5 8 10 7 5 22 6 13 5 9 9 16 13 3 24 6 8 6 8 7 9 17 12 12 7 10 7 14 5
GO:0000373 Group II intron splicing 309 29 12 11 10 9 10 10 10 10 0 10 11 16 10 18 11 3 12 10 14 0 9 6 11 13 9 11 11 11 11 10 10
GO:0006378 mRNA polyadenylation 291 31 8 9 7 14 8 8 8 10 5 7 7 8 9 21 11 7 23 10 8 3 8 8 7 15 7 10 12 8 7 8 10
GO:0050684 regulation of mRNA processing 283 31 9 8 6 15 6 7 7 9 4 9 6 7 7 19 14 5 18 11 13 2 8 8 7 16 8 8 9 8 9 8 12
GO:0009452 7-methylguanosine RNA capping 250 31 8 10 5 11 7 4 3 4 6 10 5 5 14 18 18 3 15 7 9 4 10 8 6 9 6 9 7 8 6 7 8
GO:0036260 RNA capping 250 31 8 10 5 11 7 4 3 4 6 10 5 5 14 18 18 3 15 7 9 4 10 8 6 9 6 9 7 8 6 7 8
GO:0000245 spliceosomal complex assembly 247 31 13 9 5 13 6 5 5 8 3 12 6 5 5 17 10 5 20 7 5 3 6 8 9 15 8 6 5 6 8 4 10
GO:0043628 ncRNA 3'-end processing 246 31 8 11 6 10 7 7 6 6 10 7 6 11 10 8 11 4 17 7 8 7 5 7 8 7 5 10 9 7 8 7 6
GO:0006379 mRNA cleavage 240 31 8 11 6 12 6 6 7 7 4 8 6 8 7 15 9 8 13 8 7 3 9 7 6 10 6 6 7 7 7 6 10
GO:0031425 chloroplast RNA processing 223 31 12 14 4 11 9 6 5 9 2 9 6 8 7 14 7 5 14 6 8 2 4 3 5 10 7 6 6 6 10 4 4
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 214 31 10 7 4 8 6 4 5 5 7 6 4 6 7 11 16 8 17 5 9 3 6 5 4 8 8 6 5 4 6 5 9
GO:0000387 spliceosomal snRNP assembly 207 31 12 7 5 8 7 4 5 7 3 6 6 7 6 10 5 2 13 8 7 3 6 11 7 10 4 8 9 4 6 5 6
GO:0031053 primary miRNA processing 186 31 6 6 5 7 6 3 5 5 4 7 5 4 4 9 10 5 7 9 7 3 6 7 5 10 6 5 6 5 4 7 8
GO:0043484 regulation of RNA splicing 183 30 6 6 5 7 5 5 4 5 3 6 3 6 6 12 7 5 12 5 8 0 6 5 4 11 6 5 7 5 5 5 8
GO:0030488 tRNA methylation 180 31 5 5 3 5 4 4 3 5 3 6 4 7 4 14 17 3 9 6 8 3 7 5 5 9 5 5 6 5 6 5 4
GO:0031167 rRNA methylation 178 31 4 11 2 4 8 3 2 17 4 6 2 4 6 9 7 2 13 3 4 4 4 4 4 7 8 9 4 6 4 11 2
GO:0006370 7-methylguanosine mRNA capping 177 31 6 7 3 7 5 3 2 3 4 6 4 3 12 12 15 3 8 6 8 3 7 7 4 5 4 7 5 4 4 5 5
GO:0031440 regulation of mRNA 3'-end processing 177 31 6 5 3 12 4 5 5 6 3 6 5 3 4 11 9 2 12 7 7 2 5 5 4 9 4 5 5 5 6 5 7
GO:0002097 tRNA wobble base modification 175 31 5 5 5 6 5 5 5 8 4 6 5 5 5 11 5 1 12 5 5 7 5 4 5 8 6 5 5 7 5 5 5
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 172 31 7 6 4 12 4 4 4 5 3 7 5 3 4 11 10 1 11 6 6 2 5 5 4 7 4 5 4 5 8 5 5
GO:0010599 production of lsiRNA involved in RNA interference 171 30 3 4 9 3 6 5 6 3 2 4 6 5 6 15 4 4 7 2 4 0 11 2 6 8 6 9 8 3 3 6 11
GO:0042780 tRNA 3'-end processing 169 31 6 5 4 8 5 4 4 4 7 5 4 9 8 7 5 3 6 5 6 5 4 5 5 5 4 8 7 5 6 5 5
GO:0045292 mRNA cis splicing, via spliceosome 168 31 5 12 5 5 6 6 5 5 3 5 5 7 4 8 4 4 11 4 5 4 4 6 4 9 4 4 4 4 4 5 7
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 161 30 5 3 6 4 6 2 3 3 1 4 5 5 7 16 7 5 9 6 11 0 4 5 4 4 2 9 9 5 3 4 4
GO:0002098 tRNA wobble uridine modification 138 30 4 4 4 5 4 4 4 7 3 5 4 4 4 9 4 0 7 4 4 6 4 3 4 6 5 4 4 6 4 4 4
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 134 31 5 4 2 10 3 3 3 4 2 5 4 2 3 9 8 1 10 5 6 1 4 4 3 6 3 3 3 4 5 4 5
GO:0006376 mRNA splice site selection 127 31 5 5 3 7 2 3 3 3 2 4 2 3 4 6 4 3 17 4 4 1 3 5 3 6 4 3 3 3 3 3 6
GO:0000469 cleavage involved in rRNA processing 118 31 4 19 3 5 5 3 3 3 3 5 4 3 3 5 3 3 5 3 2 1 3 2 3 3 3 3 3 3 3 3 4
GO:0035279 mRNA cleavage involved in gene silencing by miRNA 113 30 4 7 3 6 3 3 4 4 1 4 3 5 3 5 4 4 3 4 3 0 5 3 3 5 3 3 3 3 4 3 5
GO:0010239 chloroplast mRNA processing 110 30 5 4 3 5 3 5 3 4 0 3 3 5 3 7 4 2 6 4 4 1 3 2 3 5 4 3 3 3 4 3 3
GO:0000966 RNA 5'-end processing 106 17 0 4 0 7 20 0 0 0 0 1 0 5 8 2 4 0 2 0 5 0 0 0 12 24 0 2 2 6 1 1 0
GO:0048024 regulation of mRNA splicing, via spliceosome 106 30 3 3 3 3 2 2 2 3 1 3 1 4 3 8 5 3 6 4 6 0 3 3 3 7 4 3 4 3 3 3 5
GO:1901259 chloroplast rRNA processing 103 31 5 4 3 5 3 3 3 4 1 3 3 4 3 6 4 1 5 4 3 2 3 2 3 4 3 3 3 3 4 3 3
GO:0000380 alternative mRNA splicing, via spliceosome 101 29 4 4 3 3 3 2 2 3 0 2 1 2 3 7 5 3 6 4 5 0 4 3 3 6 3 3 4 3 2 3 5
GO:0001682 tRNA 5'-leader removal 100 31 4 3 2 3 3 2 2 3 2 3 2 3 2 12 2 3 13 2 2 2 2 3 2 4 2 2 2 2 4 5 2
GO:0034227 tRNA thio-modification 84 31 5 4 3 4 3 2 5 1 2 3 2 2 2 3 3 3 5 2 2 1 3 2 2 3 2 3 3 2 3 2 2
GO:0016180 snRNA processing 83 30 3 2 2 2 2 3 2 3 1 2 2 4 2 2 6 0 13 2 5 1 2 2 3 3 2 2 2 2 2 2 2
GO:0000478 endonucleolytic cleavage involved in rRNA processing 80 30 3 18 2 3 2 2 2 2 2 3 2 2 2 3 2 2 4 2 1 0 2 1 2 2 2 2 1 2 2 2 3
GO:0000381 regulation of alternative mRNA splicing, via spliceosome 74 29 2 2 2 2 2 1 1 2 0 2 1 2 2 6 4 2 5 3 4 0 3 2 2 5 2 2 3 2 2 2 4
GO:0008616 queuosine biosynthetic process 67 25 0 0 2 0 0 2 2 3 2 0 2 2 2 4 2 1 7 3 2 3 2 4 2 5 3 2 2 4 0 2 2
GO:0000244 spliceosomal tri-snRNP complex assembly 65 30 6 2 1 2 4 1 1 1 1 2 3 1 2 2 1 0 7 2 1 1 2 1 2 4 1 4 4 1 1 2 2
GO:0042779 tRNA 3'-trailer cleavage 57 31 2 2 1 2 2 1 1 1 4 2 1 1 5 2 2 1 2 2 1 3 1 3 2 2 1 2 3 1 2 1 1
GO:0034472 snRNA 3'-end processing 48 30 1 1 1 1 1 2 1 1 1 1 1 1 1 1 5 0 11 1 2 1 1 1 2 2 1 1 1 1 1 1 1
GO:0034477 U6 snRNA 3'-end processing 48 30 1 1 1 1 1 2 1 1 1 1 1 1 1 1 5 0 11 1 2 1 1 1 2 2 1 1 1 1 1 1 1
GO:0000372 Group I intron splicing 46 28 2 1 1 1 1 1 1 3 0 1 1 5 1 2 1 0 1 2 3 0 1 2 2 1 2 1 1 3 2 2 1
GO:0000376 RNA splicing, via transesterification reactions with guanosine as nucleophile 46 28 2 1 1 1 1 1 1 3 0 1 1 5 1 2 1 0 1 2 3 0 1 2 2 1 2 1 1 3 2 2 1
GO:0070475 rRNA base methylation 44 27 2 2 0 2 2 1 0 1 1 1 0 2 1 3 2 0 2 1 2 1 2 2 2 1 2 1 1 2 2 2 1
GO:0030490 maturation of SSU-rRNA 43 30 1 9 1 1 2 1 1 1 2 1 1 1 1 2 1 0 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:1900363 regulation of mRNA polyadenylation 43 31 1 1 1 2 1 2 2 2 1 1 1 1 1 2 1 1 2 2 1 1 1 1 1 3 1 2 2 1 1 1 2
GO:0043144 snoRNA processing 42 30 2 2 1 2 2 1 1 1 1 2 2 1 1 2 1 0 3 1 1 1 1 1 1 2 1 1 1 1 3 1 1
GO:0000354 cis assembly of pre-catalytic spliceosome 39 31 2 2 1 1 1 1 1 1 1 2 1 1 1 2 1 1 2 1 1 1 1 1 1 3 1 1 1 1 1 1 2
GO:0002103 endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 39 28 2 2 1 2 1 1 1 1 0 2 1 1 1 3 1 1 3 1 1 0 2 0 1 2 1 1 1 1 1 1 2
GO:0071076 RNA 3' uridylation 39 31 1 1 1 1 1 1 1 1 2 3 1 4 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0019988 charged-tRNA amino acid modification 38 31 5 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA 38 31 5 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0000963 mitochondrial RNA processing 37 31 2 2 1 2 1 1 1 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 1 1 1
GO:0002100 tRNA wobble adenosine to inosine editing 37 31 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 5 1 1 1 1 1 1 2 1 1 1 1 1 1 1
GO:0070526 threonylcarbamoyladenosine biosynthetic process 37 30 1 1 1 1 1 1 1 1 3 1 1 1 1 2 1 0 2 1 1 2 2 1 1 1 1 1 1 1 1 1 2
GO:0031054 pre-miRNA processing 35 27 1 1 1 2 1 1 1 2 0 1 1 2 1 2 2 1 0 1 1 0 3 1 1 2 1 1 1 1 1 1 0
GO:0000470 maturation of LSU-rRNA 34 30 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 0 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 34 30 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 0 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 34 30 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 0 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0031125 rRNA 3'-end processing 29 24 1 5 1 1 1 1 1 1 2 1 1 1 1 0 1 1 0 1 0 1 0 1 1 0 0 1 1 1 1 1 0
GO:0000374 Group III intron splicing 23 19 0 1 2 1 1 2 1 2 0 0 0 0 1 2 0 0 1 0 0 0 1 1 1 0 1 0 1 1 1 1 1
GO:0031426 polycistronic mRNA processing 16 15 1 1 0 0 1 0 0 1 0 1 1 1 0 2 1 0 1 0 0 0 0 0 0 1 0 1 1 1 1 0 0
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 9 2 0 8 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0036265 RNA (guanine-N7)-methylation 7 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 1
GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000460 maturation of 5.8S rRNA 5 2 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5 2 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031119 tRNA pseudouridine synthesis 4 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0002943 tRNA dihydrouridine synthesis 2 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
GO:0070329 tRNA seleno-modification 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0
GO:2000232 regulation of rRNA processing 2 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:2000234 positive regulation of rRNA processing 2 2 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000390 spliceosomal complex disassembly 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
GO:0000395 mRNA 5'-splice site recognition 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000451 rRNA 2'-O-methylation 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000453 enzyme-directed rRNA 2'-O-methylation 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031118 rRNA pseudouridine synthesis 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0031591 wybutosine biosynthetic process 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0