Child GO terms
- Original GO term
- GO:0006355
- Description
- regulation of transcription, DNA-dependent
- Type
- BP
GO | description | genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0045893 | positive regulation of transcription, DNA-dependent | 5051 | 31 | 190 | 513 | 102 | 267 | 124 | 131 | 133 | 122 | 27 | 190 | 128 | 165 | 135 | 305 | 240 | 94 | 263 | 197 | 151 | 24 | 101 | 90 | 134 | 225 | 132 | 152 | 147 | 144 | 186 | 118 | 121 |
GO:0045892 | negative regulation of transcription, DNA-dependent | 4708 | 31 | 178 | 428 | 98 | 234 | 121 | 122 | 122 | 113 | 39 | 165 | 128 | 129 | 123 | 285 | 205 | 99 | 216 | 160 | 160 | 33 | 125 | 123 | 128 | 179 | 129 | 155 | 150 | 129 | 158 | 130 | 144 |
GO:0006342 | chromatin silencing | 1349 | 31 | 34 | 254 | 26 | 44 | 40 | 30 | 29 | 26 | 10 | 34 | 37 | 37 | 37 | 81 | 51 | 32 | 54 | 37 | 54 | 6 | 33 | 41 | 34 | 36 | 32 | 45 | 40 | 33 | 36 | 32 | 34 |
GO:0006357 | regulation of transcription from RNA polymerase II promoter | 1083 | 31 | 35 | 35 | 29 | 40 | 27 | 28 | 29 | 41 | 15 | 33 | 28 | 30 | 33 | 57 | 41 | 18 | 64 | 33 | 36 | 13 | 31 | 53 | 40 | 42 | 30 | 49 | 41 | 30 | 27 | 29 | 46 |
GO:0031048 | chromatin silencing by small RNA | 471 | 30 | 10 | 119 | 11 | 11 | 14 | 7 | 8 | 8 | 4 | 9 | 11 | 11 | 13 | 28 | 15 | 14 | 20 | 14 | 19 | 0 | 11 | 14 | 9 | 10 | 8 | 17 | 17 | 10 | 10 | 9 | 10 |
GO:0006346 | methylation-dependent chromatin silencing | 405 | 31 | 10 | 124 | 6 | 15 | 7 | 9 | 10 | 7 | 3 | 11 | 7 | 13 | 9 | 13 | 17 | 7 | 13 | 10 | 12 | 2 | 6 | 8 | 8 | 8 | 8 | 14 | 9 | 10 | 12 | 8 | 9 |
GO:0051090 | regulation of sequence-specific DNA binding transcription factor activity | 265 | 31 | 10 | 8 | 6 | 15 | 8 | 8 | 10 | 6 | 3 | 8 | 7 | 6 | 8 | 15 | 16 | 4 | 17 | 11 | 8 | 1 | 7 | 8 | 8 | 12 | 7 | 9 | 8 | 6 | 9 | 10 | 6 |
GO:0032784 | regulation of DNA-dependent transcription, elongation | 217 | 31 | 7 | 9 | 5 | 8 | 9 | 5 | 4 | 6 | 5 | 7 | 5 | 5 | 9 | 10 | 11 | 3 | 16 | 4 | 7 | 5 | 5 | 8 | 6 | 10 | 7 | 8 | 5 | 7 | 6 | 7 | 8 |
GO:0031935 | regulation of chromatin silencing | 199 | 31 | 9 | 14 | 4 | 7 | 7 | 7 | 5 | 5 | 2 | 9 | 5 | 6 | 6 | 11 | 9 | 3 | 7 | 7 | 7 | 2 | 5 | 6 | 6 | 6 | 7 | 6 | 5 | 7 | 8 | 5 | 6 |
GO:0043620 | regulation of DNA-dependent transcription in response to stress | 162 | 29 | 5 | 5 | 2 | 8 | 3 | 5 | 6 | 4 | 0 | 4 | 5 | 5 | 5 | 10 | 9 | 2 | 11 | 9 | 4 | 0 | 4 | 6 | 4 | 10 | 5 | 6 | 6 | 5 | 4 | 6 | 4 |
GO:0070919 | production of siRNA involved in chromatin silencing by small RNA | 161 | 30 | 5 | 3 | 6 | 4 | 6 | 2 | 3 | 3 | 1 | 4 | 5 | 5 | 7 | 16 | 7 | 5 | 9 | 6 | 11 | 0 | 4 | 5 | 4 | 4 | 2 | 9 | 9 | 5 | 3 | 4 | 4 |
GO:0043433 | negative regulation of sequence-specific DNA binding transcription factor activity | 153 | 30 | 7 | 5 | 4 | 12 | 4 | 4 | 4 | 4 | 2 | 5 | 4 | 3 | 5 | 8 | 9 | 2 | 8 | 8 | 4 | 0 | 5 | 3 | 5 | 7 | 4 | 6 | 5 | 3 | 6 | 4 | 3 |
GO:0043618 | regulation of transcription from RNA polymerase II promoter in response to stress | 98 | 29 | 3 | 3 | 2 | 5 | 2 | 3 | 3 | 2 | 0 | 3 | 2 | 3 | 3 | 7 | 6 | 1 | 8 | 4 | 2 | 0 | 2 | 5 | 2 | 5 | 3 | 4 | 4 | 3 | 2 | 3 | 3 |
GO:0006344 | maintenance of chromatin silencing | 81 | 30 | 2 | 2 | 2 | 3 | 2 | 4 | 2 | 2 | 0 | 2 | 4 | 2 | 2 | 6 | 3 | 3 | 1 | 3 | 5 | 1 | 2 | 1 | 3 | 5 | 3 | 2 | 3 | 3 | 3 | 3 | 2 |
GO:0090309 | positive regulation of methylation-dependent chromatin silencing | 68 | 30 | 5 | 6 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 5 | 1 | 1 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 5 | 1 | 2 |
GO:0090308 | regulation of methylation-dependent chromatin silencing | 68 | 30 | 5 | 6 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 5 | 1 | 1 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 5 | 1 | 2 |
GO:0031937 | positive regulation of chromatin silencing | 68 | 30 | 5 | 6 | 1 | 3 | 1 | 3 | 2 | 2 | 1 | 5 | 1 | 1 | 2 | 3 | 4 | 1 | 1 | 2 | 3 | 0 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 3 | 5 | 1 | 2 |
GO:0032786 | positive regulation of DNA-dependent transcription, elongation | 65 | 29 | 3 | 2 | 2 | 2 | 5 | 1 | 1 | 3 | 1 | 3 | 2 | 1 | 1 | 3 | 3 | 0 | 6 | 0 | 2 | 1 | 1 | 2 | 2 | 3 | 2 | 4 | 1 | 2 | 2 | 1 | 3 |
GO:0034243 | regulation of transcription elongation from RNA polymerase II promoter | 61 | 31 | 2 | 1 | 1 | 2 | 4 | 1 | 1 | 3 | 2 | 2 | 2 | 1 | 1 | 3 | 3 | 1 | 3 | 2 | 1 | 1 | 2 | 3 | 2 | 2 | 2 | 5 | 2 | 2 | 1 | 1 | 2 |
GO:0061416 | regulation of transcription from RNA polymerase II promoter in response to salt stress | 56 | 28 | 2 | 2 | 1 | 4 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 2 | 4 | 2 | 0 | 6 | 3 | 1 | 0 | 1 | 1 | 1 | 3 | 2 | 3 | 3 | 2 | 1 | 2 | 1 |
GO:0061392 | regulation of transcription from RNA polymerase II promoter in response to osmotic stress | 56 | 28 | 2 | 2 | 1 | 4 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 2 | 4 | 2 | 0 | 6 | 3 | 1 | 0 | 1 | 1 | 1 | 3 | 2 | 3 | 3 | 2 | 1 | 2 | 1 |
GO:0006990 | positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | 49 | 29 | 3 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 2 | 1 | 0 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 1 | 3 | 1 | 2 |
GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 49 | 29 | 3 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 2 | 1 | 0 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 1 | 3 | 1 | 2 |
GO:1901522 | positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus | 49 | 29 | 3 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 2 | 1 | 0 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 1 | 3 | 1 | 2 |
GO:0045013 | carbon catabolite repression of transcription | 48 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 2 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0045014 | negative regulation of transcription by glucose | 48 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 2 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0045990 | carbon catabolite regulation of transcription | 48 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 2 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0046015 | regulation of transcription by glucose | 48 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 2 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0043619 | regulation of transcription from RNA polymerase II promoter in response to oxidative stress | 42 | 29 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 3 | 4 | 1 | 2 | 1 | 1 | 0 | 1 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 |
GO:0016480 | negative regulation of transcription from RNA polymerase III promoter | 39 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 5 | 0 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0006359 | regulation of transcription from RNA polymerase III promoter | 39 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 5 | 0 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0006348 | chromatin silencing at telomere | 36 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 3 |
GO:0031554 | regulation of DNA-dependent transcription, termination | 34 | 26 | 1 | 2 | 1 | 3 | 1 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 |
GO:0031564 | transcription antitermination | 33 | 25 | 1 | 2 | 1 | 3 | 1 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 |
GO:0031555 | transcriptional attenuation | 33 | 25 | 1 | 2 | 1 | 3 | 1 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 |
GO:0010964 | regulation of chromatin silencing by small RNA | 31 | 28 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 19 | 15 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 2 | 2 | 0 | 1 | 1 | 3 |
GO:0032968 | positive regulation of transcription elongation from RNA polymerase II promoter | 18 | 13 | 1 | 0 | 0 | 0 | 3 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 3 | 0 | 1 | 0 | 0 | 0 |
GO:0031936 | negative regulation of chromatin silencing | 9 | 7 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain | 5 | 5 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000183 | chromatin silencing at rDNA | 2 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0034244 | negative regulation of transcription elongation from RNA polymerase II promoter | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0032785 | negative regulation of DNA-dependent transcription, elongation | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0030466 | chromatin silencing at silent mating-type cassette | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |