Child GO terms
- Original GO term
- GO:0003723
- Description
- RNA binding
- Type
- MF
GO | description | genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0008135 | translation factor activity, nucleic acid binding | 3574 | 31 | 128 | 146 | 82 | 170 | 110 | 73 | 80 | 84 | 55 | 107 | 87 | 94 | 108 | 190 | 151 | 60 | 265 | 114 | 182 | 61 | 106 | 147 | 86 | 145 | 88 | 125 | 115 | 90 | 97 | 89 | 139 |
GO:0003743 | translation initiation factor activity | 2135 | 31 | 87 | 100 | 51 | 113 | 67 | 44 | 48 | 49 | 32 | 70 | 52 | 54 | 66 | 114 | 94 | 35 | 146 | 73 | 69 | 44 | 65 | 90 | 52 | 93 | 45 | 74 | 66 | 57 | 58 | 47 | 80 |
GO:0019843 | rRNA binding | 1432 | 31 | 34 | 96 | 37 | 44 | 50 | 21 | 30 | 36 | 26 | 19 | 37 | 47 | 30 | 79 | 54 | 30 | 68 | 40 | 43 | 11 | 103 | 43 | 23 | 60 | 29 | 103 | 71 | 25 | 25 | 45 | 73 |
GO:0003746 | translation elongation factor activity | 1091 | 31 | 29 | 35 | 22 | 45 | 33 | 23 | 25 | 24 | 19 | 26 | 20 | 27 | 31 | 56 | 44 | 18 | 95 | 32 | 100 | 13 | 30 | 46 | 24 | 40 | 30 | 41 | 40 | 24 | 29 | 33 | 37 |
GO:0003727 | single-stranded RNA binding | 1015 | 31 | 33 | 49 | 25 | 47 | 25 | 24 | 25 | 22 | 18 | 32 | 22 | 28 | 23 | 53 | 32 | 17 | 38 | 32 | 30 | 19 | 24 | 45 | 24 | 40 | 25 | 116 | 29 | 24 | 33 | 25 | 36 |
GO:0003729 | mRNA binding | 967 | 31 | 30 | 49 | 24 | 49 | 23 | 26 | 25 | 23 | 15 | 30 | 23 | 27 | 27 | 45 | 38 | 12 | 61 | 36 | 27 | 14 | 30 | 37 | 26 | 38 | 24 | 63 | 29 | 27 | 27 | 25 | 37 |
GO:0030533 | triplet codon-amino acid adaptor activity | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000498 | base pairing with RNA | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000499 | base pairing with mRNA | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0003725 | double-stranded RNA binding | 641 | 31 | 30 | 24 | 13 | 24 | 28 | 10 | 11 | 18 | 17 | 27 | 24 | 16 | 15 | 53 | 29 | 10 | 23 | 17 | 27 | 6 | 15 | 22 | 25 | 39 | 26 | 15 | 16 | 20 | 15 | 14 | 12 |
GO:0008187 | poly-pyrimidine tract binding | 580 | 31 | 21 | 23 | 14 | 29 | 15 | 15 | 16 | 14 | 11 | 21 | 13 | 17 | 12 | 29 | 18 | 11 | 19 | 20 | 18 | 12 | 14 | 33 | 14 | 23 | 14 | 44 | 17 | 14 | 21 | 16 | 22 |
GO:0008266 | poly(U) RNA binding | 580 | 31 | 21 | 23 | 14 | 29 | 15 | 15 | 16 | 14 | 11 | 21 | 13 | 17 | 12 | 29 | 18 | 11 | 19 | 20 | 18 | 12 | 14 | 33 | 14 | 23 | 14 | 44 | 17 | 14 | 21 | 16 | 22 |
GO:0000049 | tRNA binding | 448 | 31 | 15 | 17 | 15 | 16 | 16 | 11 | 13 | 10 | 12 | 14 | 12 | 10 | 13 | 22 | 13 | 9 | 27 | 11 | 17 | 14 | 15 | 12 | 13 | 14 | 18 | 17 | 15 | 12 | 10 | 21 | 14 |
GO:0008079 | translation termination factor activity | 386 | 31 | 14 | 12 | 10 | 14 | 11 | 7 | 8 | 11 | 5 | 13 | 16 | 14 | 13 | 21 | 13 | 7 | 25 | 10 | 14 | 5 | 11 | 12 | 11 | 13 | 13 | 16 | 12 | 10 | 11 | 10 | 24 |
GO:0003747 | translation release factor activity | 386 | 31 | 14 | 12 | 10 | 14 | 11 | 7 | 8 | 11 | 5 | 13 | 16 | 14 | 13 | 21 | 13 | 7 | 25 | 10 | 14 | 5 | 11 | 12 | 11 | 13 | 13 | 16 | 12 | 10 | 11 | 10 | 24 |
GO:0008312 | 7S RNA binding | 311 | 31 | 14 | 10 | 8 | 17 | 7 | 7 | 6 | 6 | 6 | 10 | 7 | 9 | 9 | 19 | 9 | 6 | 19 | 10 | 10 | 5 | 8 | 12 | 6 | 13 | 16 | 14 | 14 | 6 | 8 | 7 | 13 |
GO:0017069 | snRNA binding | 308 | 31 | 9 | 9 | 6 | 13 | 8 | 8 | 9 | 7 | 4 | 7 | 8 | 8 | 8 | 19 | 12 | 6 | 23 | 12 | 20 | 2 | 10 | 5 | 7 | 15 | 6 | 21 | 15 | 7 | 6 | 7 | 11 |
GO:0016149 | translation release factor activity, codon specific | 292 | 31 | 10 | 8 | 8 | 11 | 9 | 5 | 6 | 10 | 4 | 11 | 8 | 12 | 10 | 16 | 8 | 6 | 23 | 8 | 12 | 4 | 9 | 9 | 8 | 10 | 6 | 9 | 9 | 8 | 9 | 8 | 18 |
GO:0000339 | RNA cap binding | 217 | 31 | 6 | 6 | 6 | 11 | 8 | 7 | 6 | 5 | 4 | 6 | 7 | 8 | 6 | 9 | 9 | 7 | 13 | 7 | 6 | 6 | 5 | 6 | 6 | 9 | 6 | 8 | 7 | 6 | 6 | 7 | 8 |
GO:0008097 | 5S rRNA binding | 201 | 31 | 5 | 5 | 4 | 8 | 9 | 5 | 4 | 5 | 1 | 4 | 4 | 11 | 14 | 11 | 9 | 2 | 14 | 6 | 5 | 3 | 6 | 7 | 6 | 8 | 6 | 8 | 7 | 3 | 7 | 8 | 6 |
GO:0035197 | siRNA binding | 189 | 30 | 7 | 7 | 5 | 7 | 5 | 5 | 4 | 5 | 2 | 6 | 6 | 7 | 8 | 8 | 7 | 4 | 5 | 6 | 7 | 0 | 10 | 6 | 5 | 7 | 6 | 8 | 8 | 6 | 6 | 5 | 11 |
GO:0070717 | poly-purine tract binding | 188 | 31 | 4 | 14 | 3 | 8 | 3 | 3 | 3 | 3 | 2 | 4 | 3 | 3 | 4 | 7 | 4 | 1 | 5 | 5 | 5 | 2 | 4 | 8 | 3 | 6 | 4 | 59 | 3 | 3 | 4 | 2 | 6 |
GO:0035198 | miRNA binding | 144 | 30 | 3 | 5 | 6 | 5 | 3 | 3 | 4 | 4 | 1 | 3 | 3 | 5 | 4 | 11 | 8 | 3 | 4 | 4 | 7 | 0 | 9 | 5 | 4 | 6 | 4 | 6 | 5 | 4 | 3 | 4 | 8 |
GO:0008143 | poly(A) RNA binding | 136 | 31 | 4 | 13 | 3 | 8 | 3 | 3 | 3 | 3 | 2 | 4 | 3 | 3 | 4 | 7 | 4 | 1 | 5 | 5 | 5 | 2 | 4 | 8 | 3 | 6 | 4 | 8 | 3 | 3 | 4 | 2 | 6 |
GO:0003730 | mRNA 3'-UTR binding | 97 | 31 | 3 | 5 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 5 | 2 | 4 | 5 | 2 | 3 | 4 | 3 | 2 | 2 | 5 | 2 | 2 | 2 | 12 | 3 | 2 | 4 | 2 | 3 |
GO:0030515 | snoRNA binding | 83 | 27 | 5 | 4 | 0 | 3 | 4 | 0 | 1 | 0 | 1 | 4 | 2 | 1 | 1 | 6 | 5 | 1 | 1 | 0 | 2 | 1 | 1 | 5 | 2 | 6 | 2 | 17 | 1 | 3 | 1 | 1 | 2 |
GO:0048027 | mRNA 5'-UTR binding | 80 | 29 | 3 | 2 | 1 | 5 | 2 | 3 | 2 | 1 | 0 | 2 | 2 | 3 | 2 | 6 | 4 | 2 | 6 | 3 | 2 | 0 | 3 | 4 | 2 | 4 | 1 | 5 | 1 | 2 | 2 | 1 | 4 |
GO:0017070 | U6 snRNA binding | 68 | 31 | 3 | 2 | 1 | 6 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 2 | 1 | 6 | 2 | 7 | 1 | 2 | 2 | 2 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 3 |
GO:0030623 | U5 snRNA binding | 68 | 31 | 3 | 2 | 1 | 6 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 2 | 1 | 6 | 2 | 7 | 1 | 2 | 2 | 2 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 3 |
GO:0017091 | AU-rich element binding | 58 | 28 | 3 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 2 | 1 | 4 | 3 | 1 | 4 | 4 | 2 | 0 | 1 | 0 | 2 | 2 | 2 | 4 | 1 | 2 | 3 | 1 | 1 |
GO:0034046 | poly(G) RNA binding | 52 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 51 | 0 | 0 | 0 | 0 | 0 |
GO:0036002 | pre-mRNA binding | 48 | 30 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0097157 | pre-mRNA intronic binding | 46 | 30 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 2 | 1 |
GO:0030619 | U1 snRNA binding | 45 | 29 | 1 | 2 | 1 | 2 | 2 | 2 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 4 | 1 | 1 | 1 | 2 |
GO:0030620 | U2 snRNA binding | 44 | 29 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 4 | 1 | 1 | 1 | 2 |
GO:0000340 | RNA 7-methylguanosine cap binding | 40 | 30 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 3 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 1 |
GO:0070180 | LSU rRNA binding | 30 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0070878 | primary miRNA binding | 30 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0070883 | pre-miRNA binding | 30 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0070181 | SSU rRNA binding | 5 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
GO:0034511 | U3 snoRNA binding | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 |
GO:0030627 | pre-mRNA 5'-splice site binding | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
GO:0033592 | RNA strand annealing activity | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0034512 | box C/D snoRNA binding | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |