Child GO terms
- Original GO term
- GO:0003676
- Description
- nucleic acid binding
- Type
- MF
GO | description | genes | species | aly | ath | atr | bra | bvu | cla | cme | cpa | cre | cru | csi | egr | fve | gma | gra | lja | mdo | mes | mtr | olu | osa | ppa | ppe | ptr | rco | sly | stu | tca | tpa | vvi | zma |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GO:0003677 | DNA binding | 64654 | 31 | 2125 | 2361 | 1216 | 3257 | 1554 | 1547 | 1528 | 2037 | 730 | 2011 | 1615 | 1953 | 1921 | 4153 | 2925 | 1088 | 3825 | 2296 | 2739 | 483 | 2440 | 1583 | 1812 | 2828 | 1868 | 2522 | 2452 | 1712 | 1842 | 1591 | 2640 |
GO:0003723 | RNA binding | 25450 | 31 | 711 | 1647 | 501 | 909 | 693 | 481 | 531 | 566 | 609 | 579 | 515 | 594 | 660 | 1150 | 807 | 478 | 1346 | 624 | 829 | 321 | 3522 | 657 | 705 | 849 | 560 | 1043 | 900 | 706 | 551 | 558 | 848 |
GO:0043565 | sequence-specific DNA binding | 14943 | 31 | 569 | 469 | 248 | 787 | 327 | 359 | 366 | 638 | 82 | 576 | 402 | 416 | 358 | 1133 | 807 | 231 | 832 | 533 | 571 | 50 | 474 | 323 | 432 | 691 | 452 | 543 | 525 | 351 | 432 | 348 | 618 |
GO:0008135 | translation factor activity, nucleic acid binding | 3574 | 31 | 128 | 146 | 82 | 170 | 110 | 73 | 80 | 84 | 55 | 107 | 87 | 94 | 108 | 190 | 151 | 60 | 265 | 114 | 182 | 61 | 106 | 147 | 86 | 145 | 88 | 125 | 115 | 90 | 97 | 89 | 139 |
GO:0043566 | structure-specific DNA binding | 2191 | 31 | 73 | 87 | 66 | 89 | 65 | 61 | 62 | 66 | 31 | 74 | 61 | 59 | 69 | 128 | 86 | 38 | 106 | 71 | 76 | 30 | 58 | 64 | 61 | 92 | 64 | 112 | 77 | 63 | 70 | 65 | 67 |
GO:0003743 | translation initiation factor activity | 2135 | 31 | 87 | 100 | 51 | 113 | 67 | 44 | 48 | 49 | 32 | 70 | 52 | 54 | 66 | 114 | 94 | 35 | 146 | 73 | 69 | 44 | 65 | 90 | 52 | 93 | 45 | 74 | 66 | 57 | 58 | 47 | 80 |
GO:0001067 | regulatory region nucleic acid binding | 1699 | 31 | 66 | 66 | 33 | 89 | 38 | 44 | 44 | 41 | 7 | 63 | 47 | 51 | 44 | 114 | 95 | 29 | 93 | 69 | 64 | 5 | 55 | 47 | 42 | 70 | 44 | 63 | 65 | 45 | 57 | 39 | 70 |
GO:0000975 | regulatory region DNA binding | 1699 | 31 | 66 | 66 | 33 | 89 | 38 | 44 | 44 | 41 | 7 | 63 | 47 | 51 | 44 | 114 | 95 | 29 | 93 | 69 | 64 | 5 | 55 | 47 | 42 | 70 | 44 | 63 | 65 | 45 | 57 | 39 | 70 |
GO:0044212 | transcription regulatory region DNA binding | 1697 | 31 | 66 | 65 | 33 | 89 | 37 | 44 | 44 | 41 | 7 | 63 | 47 | 51 | 44 | 114 | 95 | 29 | 93 | 69 | 64 | 5 | 55 | 47 | 42 | 70 | 44 | 63 | 65 | 45 | 57 | 39 | 70 |
GO:0019843 | rRNA binding | 1432 | 31 | 34 | 96 | 37 | 44 | 50 | 21 | 30 | 36 | 26 | 19 | 37 | 47 | 30 | 79 | 54 | 30 | 68 | 40 | 43 | 11 | 103 | 43 | 23 | 60 | 29 | 103 | 71 | 25 | 25 | 45 | 73 |
GO:0003690 | double-stranded DNA binding | 1396 | 31 | 48 | 52 | 45 | 60 | 42 | 41 | 42 | 47 | 21 | 44 | 36 | 35 | 43 | 73 | 51 | 25 | 71 | 46 | 41 | 22 | 35 | 40 | 39 | 57 | 41 | 75 | 53 | 38 | 47 | 43 | 43 |
GO:0000976 | transcription regulatory region sequence-specific DNA binding | 1132 | 31 | 41 | 38 | 22 | 65 | 23 | 31 | 33 | 27 | 3 | 38 | 30 | 34 | 27 | 79 | 69 | 17 | 68 | 45 | 42 | 2 | 38 | 30 | 27 | 47 | 29 | 43 | 46 | 26 | 38 | 26 | 48 |
GO:0003746 | translation elongation factor activity | 1091 | 31 | 29 | 35 | 22 | 45 | 33 | 23 | 25 | 24 | 19 | 26 | 20 | 27 | 31 | 56 | 44 | 18 | 95 | 32 | 100 | 13 | 30 | 46 | 24 | 40 | 30 | 41 | 40 | 24 | 29 | 33 | 37 |
GO:0003727 | single-stranded RNA binding | 1015 | 31 | 33 | 49 | 25 | 47 | 25 | 24 | 25 | 22 | 18 | 32 | 22 | 28 | 23 | 53 | 32 | 17 | 38 | 32 | 30 | 19 | 24 | 45 | 24 | 40 | 25 | 116 | 29 | 24 | 33 | 25 | 36 |
GO:0003729 | mRNA binding | 967 | 31 | 30 | 49 | 24 | 49 | 23 | 26 | 25 | 23 | 15 | 30 | 23 | 27 | 27 | 45 | 38 | 12 | 61 | 36 | 27 | 14 | 30 | 37 | 26 | 38 | 24 | 63 | 29 | 27 | 27 | 25 | 37 |
GO:0003684 | damaged DNA binding | 886 | 31 | 25 | 33 | 19 | 29 | 34 | 26 | 25 | 33 | 22 | 24 | 25 | 33 | 21 | 47 | 31 | 17 | 28 | 26 | 26 | 32 | 27 | 33 | 25 | 33 | 40 | 46 | 25 | 23 | 22 | 24 | 32 |
GO:0003697 | single-stranded DNA binding | 808 | 31 | 24 | 38 | 19 | 37 | 23 | 23 | 22 | 24 | 10 | 30 | 25 | 24 | 23 | 51 | 37 | 13 | 36 | 26 | 28 | 10 | 21 | 21 | 24 | 38 | 25 | 36 | 22 | 25 | 26 | 23 | 24 |
GO:0030533 | triplet codon-amino acid adaptor activity | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000499 | base pairing with mRNA | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000498 | base pairing with RNA | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000496 | base pairing | 688 | 1 | 0 | 688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0003725 | double-stranded RNA binding | 641 | 31 | 30 | 24 | 13 | 24 | 28 | 10 | 11 | 18 | 17 | 27 | 24 | 16 | 15 | 53 | 29 | 10 | 23 | 17 | 27 | 6 | 15 | 22 | 25 | 39 | 26 | 15 | 16 | 20 | 15 | 14 | 12 |
GO:0008187 | poly-pyrimidine tract binding | 580 | 31 | 21 | 23 | 14 | 29 | 15 | 15 | 16 | 14 | 11 | 21 | 13 | 17 | 12 | 29 | 18 | 11 | 19 | 20 | 18 | 12 | 14 | 33 | 14 | 23 | 14 | 44 | 17 | 14 | 21 | 16 | 22 |
GO:0008266 | poly(U) RNA binding | 580 | 31 | 21 | 23 | 14 | 29 | 15 | 15 | 16 | 14 | 11 | 21 | 13 | 17 | 12 | 29 | 18 | 11 | 19 | 20 | 18 | 12 | 14 | 33 | 14 | 23 | 14 | 44 | 17 | 14 | 21 | 16 | 22 |
GO:0030983 | mismatched DNA binding | 537 | 31 | 16 | 13 | 21 | 16 | 17 | 15 | 17 | 21 | 11 | 12 | 12 | 13 | 13 | 27 | 18 | 7 | 40 | 17 | 12 | 11 | 13 | 17 | 13 | 22 | 16 | 40 | 27 | 12 | 12 | 17 | 19 |
GO:0000049 | tRNA binding | 448 | 31 | 15 | 17 | 15 | 16 | 16 | 11 | 13 | 10 | 12 | 14 | 12 | 10 | 13 | 22 | 13 | 9 | 27 | 11 | 17 | 14 | 15 | 12 | 13 | 14 | 18 | 17 | 15 | 12 | 10 | 21 | 14 |
GO:0003747 | translation release factor activity | 386 | 31 | 14 | 12 | 10 | 14 | 11 | 7 | 8 | 11 | 5 | 13 | 16 | 14 | 13 | 21 | 13 | 7 | 25 | 10 | 14 | 5 | 11 | 12 | 11 | 13 | 13 | 16 | 12 | 10 | 11 | 10 | 24 |
GO:0008079 | translation termination factor activity | 386 | 31 | 14 | 12 | 10 | 14 | 11 | 7 | 8 | 11 | 5 | 13 | 16 | 14 | 13 | 21 | 13 | 7 | 25 | 10 | 14 | 5 | 11 | 12 | 11 | 13 | 13 | 16 | 12 | 10 | 11 | 10 | 24 |
GO:0042162 | telomeric DNA binding | 332 | 31 | 15 | 14 | 7 | 19 | 8 | 10 | 10 | 6 | 3 | 14 | 8 | 12 | 9 | 24 | 14 | 4 | 12 | 11 | 12 | 5 | 8 | 7 | 9 | 17 | 7 | 17 | 10 | 9 | 15 | 9 | 7 |
GO:0008312 | 7S RNA binding | 311 | 31 | 14 | 10 | 8 | 17 | 7 | 7 | 6 | 6 | 6 | 10 | 7 | 9 | 9 | 19 | 9 | 6 | 19 | 10 | 10 | 5 | 8 | 12 | 6 | 13 | 16 | 14 | 14 | 6 | 8 | 7 | 13 |
GO:0017069 | snRNA binding | 308 | 31 | 9 | 9 | 6 | 13 | 8 | 8 | 9 | 7 | 4 | 7 | 8 | 8 | 8 | 19 | 12 | 6 | 23 | 12 | 20 | 2 | 10 | 5 | 7 | 15 | 6 | 21 | 15 | 7 | 6 | 7 | 11 |
GO:0016149 | translation release factor activity, codon specific | 292 | 31 | 10 | 8 | 8 | 11 | 9 | 5 | 6 | 10 | 4 | 11 | 8 | 12 | 10 | 16 | 8 | 6 | 23 | 8 | 12 | 4 | 9 | 9 | 8 | 10 | 6 | 9 | 9 | 8 | 9 | 8 | 18 |
GO:0008327 | methyl-CpG binding | 233 | 30 | 10 | 20 | 5 | 12 | 9 | 5 | 5 | 5 | 2 | 10 | 8 | 4 | 8 | 9 | 9 | 5 | 7 | 8 | 12 | 0 | 4 | 4 | 7 | 8 | 6 | 9 | 12 | 8 | 11 | 6 | 5 |
GO:0000339 | RNA cap binding | 217 | 31 | 6 | 6 | 6 | 11 | 8 | 7 | 6 | 5 | 4 | 6 | 7 | 8 | 6 | 9 | 9 | 7 | 13 | 7 | 6 | 6 | 5 | 6 | 6 | 9 | 6 | 8 | 7 | 6 | 6 | 7 | 8 |
GO:0031490 | chromatin DNA binding | 204 | 31 | 6 | 7 | 7 | 6 | 7 | 4 | 4 | 4 | 2 | 5 | 6 | 6 | 10 | 17 | 8 | 6 | 9 | 7 | 11 | 1 | 7 | 9 | 4 | 7 | 4 | 10 | 9 | 6 | 4 | 4 | 7 |
GO:0008097 | 5S rRNA binding | 201 | 31 | 5 | 5 | 4 | 8 | 9 | 5 | 4 | 5 | 1 | 4 | 4 | 11 | 14 | 11 | 9 | 2 | 14 | 6 | 5 | 3 | 6 | 7 | 6 | 8 | 6 | 8 | 7 | 3 | 7 | 8 | 6 |
GO:0010385 | double-stranded methylated DNA binding | 197 | 31 | 10 | 11 | 6 | 6 | 5 | 7 | 6 | 5 | 2 | 9 | 6 | 5 | 7 | 9 | 8 | 4 | 5 | 6 | 9 | 1 | 5 | 6 | 6 | 7 | 6 | 5 | 5 | 7 | 9 | 6 | 8 |
GO:0035197 | siRNA binding | 189 | 30 | 7 | 7 | 5 | 7 | 5 | 5 | 4 | 5 | 2 | 6 | 6 | 7 | 8 | 8 | 7 | 4 | 5 | 6 | 7 | 0 | 10 | 6 | 5 | 7 | 6 | 8 | 8 | 6 | 6 | 5 | 11 |
GO:0070717 | poly-purine tract binding | 188 | 31 | 4 | 14 | 3 | 8 | 3 | 3 | 3 | 3 | 2 | 4 | 3 | 3 | 4 | 7 | 4 | 1 | 5 | 5 | 5 | 2 | 4 | 8 | 3 | 6 | 4 | 59 | 3 | 3 | 4 | 2 | 6 |
GO:0001047 | core promoter binding | 177 | 30 | 11 | 10 | 2 | 7 | 6 | 4 | 4 | 5 | 0 | 9 | 5 | 6 | 4 | 12 | 8 | 3 | 7 | 6 | 8 | 1 | 4 | 6 | 4 | 6 | 5 | 6 | 6 | 5 | 7 | 4 | 6 |
GO:0003691 | double-stranded telomeric DNA binding | 175 | 30 | 9 | 8 | 3 | 12 | 4 | 5 | 5 | 3 | 0 | 8 | 4 | 4 | 5 | 12 | 9 | 1 | 8 | 7 | 7 | 1 | 4 | 3 | 5 | 9 | 3 | 10 | 6 | 5 | 9 | 4 | 2 |
GO:0035198 | miRNA binding | 144 | 30 | 3 | 5 | 6 | 5 | 3 | 3 | 4 | 4 | 1 | 3 | 3 | 5 | 4 | 11 | 8 | 3 | 4 | 4 | 7 | 0 | 9 | 5 | 4 | 6 | 4 | 6 | 5 | 4 | 3 | 4 | 8 |
GO:0008143 | poly(A) RNA binding | 136 | 31 | 4 | 13 | 3 | 8 | 3 | 3 | 3 | 3 | 2 | 4 | 3 | 3 | 4 | 7 | 4 | 1 | 5 | 5 | 5 | 2 | 4 | 8 | 3 | 6 | 4 | 8 | 3 | 3 | 4 | 2 | 6 |
GO:0000987 | core promoter proximal region sequence-specific DNA binding | 120 | 31 | 4 | 4 | 4 | 4 | 3 | 3 | 4 | 3 | 3 | 3 | 5 | 2 | 4 | 7 | 6 | 4 | 5 | 2 | 4 | 1 | 4 | 2 | 4 | 4 | 4 | 5 | 6 | 3 | 4 | 4 | 5 |
GO:0001159 | core promoter proximal region DNA binding | 120 | 31 | 4 | 4 | 4 | 4 | 3 | 3 | 4 | 3 | 3 | 3 | 5 | 2 | 4 | 7 | 6 | 4 | 5 | 2 | 4 | 1 | 4 | 2 | 4 | 4 | 4 | 5 | 6 | 3 | 4 | 4 | 5 |
GO:0008301 | DNA binding, bending | 102 | 27 | 6 | 5 | 2 | 8 | 2 | 3 | 3 | 2 | 0 | 5 | 2 | 2 | 3 | 8 | 6 | 0 | 6 | 4 | 4 | 0 | 1 | 0 | 3 | 5 | 1 | 4 | 4 | 3 | 6 | 3 | 1 |
GO:0003730 | mRNA 3'-UTR binding | 97 | 31 | 3 | 5 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 5 | 2 | 4 | 5 | 2 | 3 | 4 | 3 | 2 | 2 | 5 | 2 | 2 | 2 | 12 | 3 | 2 | 4 | 2 | 3 |
GO:0003680 | AT DNA binding | 94 | 28 | 5 | 6 | 2 | 5 | 2 | 2 | 2 | 3 | 0 | 5 | 2 | 1 | 2 | 6 | 6 | 1 | 4 | 4 | 2 | 0 | 0 | 1 | 2 | 4 | 3 | 9 | 5 | 2 | 5 | 2 | 1 |
GO:0001046 | core promoter sequence-specific DNA binding | 87 | 30 | 7 | 6 | 1 | 5 | 3 | 2 | 2 | 3 | 0 | 5 | 2 | 3 | 2 | 5 | 3 | 1 | 4 | 2 | 5 | 1 | 1 | 2 | 2 | 2 | 2 | 3 | 3 | 2 | 5 | 2 | 1 |
GO:0030515 | snoRNA binding | 83 | 27 | 5 | 4 | 0 | 3 | 4 | 0 | 1 | 0 | 1 | 4 | 2 | 1 | 1 | 6 | 5 | 1 | 1 | 0 | 2 | 1 | 1 | 5 | 2 | 6 | 2 | 17 | 1 | 3 | 1 | 1 | 2 |
GO:0048027 | mRNA 5'-UTR binding | 80 | 29 | 3 | 2 | 1 | 5 | 2 | 3 | 2 | 1 | 0 | 2 | 2 | 3 | 2 | 6 | 4 | 2 | 6 | 3 | 2 | 0 | 3 | 4 | 2 | 4 | 1 | 5 | 1 | 2 | 2 | 1 | 4 |
GO:0003689 | DNA clamp loader activity | 80 | 30 | 4 | 1 | 2 | 1 | 3 | 1 | 2 | 4 | 1 | 4 | 3 | 1 | 2 | 9 | 4 | 0 | 9 | 1 | 1 | 2 | 1 | 4 | 2 | 8 | 1 | 3 | 2 | 1 | 1 | 1 | 1 |
GO:0000182 | rDNA binding | 77 | 29 | 2 | 2 | 3 | 3 | 2 | 3 | 2 | 2 | 0 | 2 | 2 | 8 | 3 | 4 | 3 | 1 | 4 | 3 | 2 | 0 | 3 | 1 | 3 | 4 | 2 | 2 | 2 | 2 | 3 | 2 | 2 |
GO:0043047 | single-stranded telomeric DNA binding | 75 | 30 | 4 | 4 | 1 | 5 | 2 | 2 | 2 | 1 | 0 | 4 | 2 | 2 | 2 | 4 | 4 | 2 | 5 | 2 | 2 | 1 | 1 | 2 | 2 | 3 | 2 | 5 | 1 | 2 | 4 | 1 | 1 |
GO:0017070 | U6 snRNA binding | 68 | 31 | 3 | 2 | 1 | 6 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 2 | 1 | 6 | 2 | 7 | 1 | 2 | 2 | 2 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 3 |
GO:0030623 | U5 snRNA binding | 68 | 31 | 3 | 2 | 1 | 6 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 2 | 1 | 6 | 2 | 7 | 1 | 2 | 2 | 2 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 3 |
GO:0017091 | AU-rich element binding | 58 | 28 | 3 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 2 | 1 | 4 | 3 | 1 | 4 | 4 | 2 | 0 | 1 | 0 | 2 | 2 | 2 | 4 | 1 | 2 | 3 | 1 | 1 |
GO:0034046 | poly(G) RNA binding | 52 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 51 | 0 | 0 | 0 | 0 | 0 |
GO:0036002 | pre-mRNA binding | 48 | 30 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 2 | 1 |
GO:0001164 | RNA polymerase I CORE element sequence-specific DNA binding | 47 | 29 | 4 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 2 | 1 | 0 | 3 | 1 | 4 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 |
GO:0001163 | RNA polymerase I regulatory region sequence-specific DNA binding | 47 | 29 | 4 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 2 | 1 | 0 | 3 | 1 | 4 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 |
GO:0080084 | 5S rDNA binding | 47 | 28 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 7 | 2 | 2 | 2 | 0 | 3 | 2 | 1 | 0 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 |
GO:0001013 | RNA polymerase I regulatory region DNA binding | 47 | 29 | 4 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 2 | 1 | 0 | 3 | 1 | 4 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 1 |
GO:0097157 | pre-mRNA intronic binding | 46 | 30 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 1 | 2 | 1 |
GO:0030619 | U1 snRNA binding | 45 | 29 | 1 | 2 | 1 | 2 | 2 | 2 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 4 | 1 | 1 | 1 | 2 |
GO:0030620 | U2 snRNA binding | 44 | 29 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 4 | 1 | 1 | 1 | 2 |
GO:0097100 | supercoiled DNA binding | 41 | 28 | 3 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 3 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 |
GO:0000340 | RNA 7-methylguanosine cap binding | 40 | 30 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 3 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 1 |
GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding | 31 | 25 | 2 | 2 | 0 | 3 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 |
GO:0090079 | translation regulator activity, nucleic acid binding | 31 | 24 | 1 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 |
GO:0001158 | enhancer sequence-specific DNA binding | 31 | 25 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 |
GO:0001012 | RNA polymerase II regulatory region DNA binding | 31 | 25 | 2 | 2 | 0 | 3 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 |
GO:0035326 | enhancer binding | 31 | 25 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 |
GO:0000900 | translation repressor activity, nucleic acid binding | 31 | 24 | 1 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 |
GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | 31 | 25 | 2 | 2 | 0 | 3 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 |
GO:0070883 | pre-miRNA binding | 30 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0070878 | primary miRNA binding | 30 | 30 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0070180 | LSU rRNA binding | 30 | 29 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
GO:0032137 | guanine/thymine mispair binding | 9 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 |
GO:0000217 | DNA secondary structure binding | 6 | 2 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0070181 | SSU rRNA binding | 5 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
GO:0032135 | DNA insertion or deletion binding | 5 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000400 | four-way junction DNA binding | 4 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0003688 | DNA replication origin binding | 4 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
GO:0070361 | mitochondrial light strand promoter anti-sense binding | 4 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0032138 | single base insertion or deletion binding | 4 | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0034511 | U3 snoRNA binding | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 |
GO:0000404 | loop DNA binding | 2 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0030627 | pre-mRNA 5'-splice site binding | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
GO:0033592 | RNA strand annealing activity | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0000403 | Y-form DNA binding | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0000405 | bubble DNA binding | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0032356 | oxidized DNA binding | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0000406 | double-strand/single-strand DNA junction binding | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0032357 | oxidized purine DNA binding | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
GO:0031492 | nucleosomal DNA binding | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
GO:0034512 | box C/D snoRNA binding | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |