Child GO terms

Original GO term
GO:0003676
Description
nucleic acid binding
Type
MF

GO description genes species aly ath atr bra bvu cla cme cpa cre cru csi egr fve gma gra lja mdo mes mtr olu osa ppa ppe ptr rco sly stu tca tpa vvi zma
GO:0003677 DNA binding 64654 31 2125 2361 1216 3257 1554 1547 1528 2037 730 2011 1615 1953 1921 4153 2925 1088 3825 2296 2739 483 2440 1583 1812 2828 1868 2522 2452 1712 1842 1591 2640
GO:0003723 RNA binding 25450 31 711 1647 501 909 693 481 531 566 609 579 515 594 660 1150 807 478 1346 624 829 321 3522 657 705 849 560 1043 900 706 551 558 848
GO:0043565 sequence-specific DNA binding 14943 31 569 469 248 787 327 359 366 638 82 576 402 416 358 1133 807 231 832 533 571 50 474 323 432 691 452 543 525 351 432 348 618
GO:0008135 translation factor activity, nucleic acid binding 3574 31 128 146 82 170 110 73 80 84 55 107 87 94 108 190 151 60 265 114 182 61 106 147 86 145 88 125 115 90 97 89 139
GO:0043566 structure-specific DNA binding 2191 31 73 87 66 89 65 61 62 66 31 74 61 59 69 128 86 38 106 71 76 30 58 64 61 92 64 112 77 63 70 65 67
GO:0003743 translation initiation factor activity 2135 31 87 100 51 113 67 44 48 49 32 70 52 54 66 114 94 35 146 73 69 44 65 90 52 93 45 74 66 57 58 47 80
GO:0001067 regulatory region nucleic acid binding 1699 31 66 66 33 89 38 44 44 41 7 63 47 51 44 114 95 29 93 69 64 5 55 47 42 70 44 63 65 45 57 39 70
GO:0000975 regulatory region DNA binding 1699 31 66 66 33 89 38 44 44 41 7 63 47 51 44 114 95 29 93 69 64 5 55 47 42 70 44 63 65 45 57 39 70
GO:0044212 transcription regulatory region DNA binding 1697 31 66 65 33 89 37 44 44 41 7 63 47 51 44 114 95 29 93 69 64 5 55 47 42 70 44 63 65 45 57 39 70
GO:0019843 rRNA binding 1432 31 34 96 37 44 50 21 30 36 26 19 37 47 30 79 54 30 68 40 43 11 103 43 23 60 29 103 71 25 25 45 73
GO:0003690 double-stranded DNA binding 1396 31 48 52 45 60 42 41 42 47 21 44 36 35 43 73 51 25 71 46 41 22 35 40 39 57 41 75 53 38 47 43 43
GO:0000976 transcription regulatory region sequence-specific DNA binding 1132 31 41 38 22 65 23 31 33 27 3 38 30 34 27 79 69 17 68 45 42 2 38 30 27 47 29 43 46 26 38 26 48
GO:0003746 translation elongation factor activity 1091 31 29 35 22 45 33 23 25 24 19 26 20 27 31 56 44 18 95 32 100 13 30 46 24 40 30 41 40 24 29 33 37
GO:0003727 single-stranded RNA binding 1015 31 33 49 25 47 25 24 25 22 18 32 22 28 23 53 32 17 38 32 30 19 24 45 24 40 25 116 29 24 33 25 36
GO:0003729 mRNA binding 967 31 30 49 24 49 23 26 25 23 15 30 23 27 27 45 38 12 61 36 27 14 30 37 26 38 24 63 29 27 27 25 37
GO:0003684 damaged DNA binding 886 31 25 33 19 29 34 26 25 33 22 24 25 33 21 47 31 17 28 26 26 32 27 33 25 33 40 46 25 23 22 24 32
GO:0003697 single-stranded DNA binding 808 31 24 38 19 37 23 23 22 24 10 30 25 24 23 51 37 13 36 26 28 10 21 21 24 38 25 36 22 25 26 23 24
GO:0030533 triplet codon-amino acid adaptor activity 688 1 0 688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000499 base pairing with mRNA 688 1 0 688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000498 base pairing with RNA 688 1 0 688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000496 base pairing 688 1 0 688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0003725 double-stranded RNA binding 641 31 30 24 13 24 28 10 11 18 17 27 24 16 15 53 29 10 23 17 27 6 15 22 25 39 26 15 16 20 15 14 12
GO:0008187 poly-pyrimidine tract binding 580 31 21 23 14 29 15 15 16 14 11 21 13 17 12 29 18 11 19 20 18 12 14 33 14 23 14 44 17 14 21 16 22
GO:0008266 poly(U) RNA binding 580 31 21 23 14 29 15 15 16 14 11 21 13 17 12 29 18 11 19 20 18 12 14 33 14 23 14 44 17 14 21 16 22
GO:0030983 mismatched DNA binding 537 31 16 13 21 16 17 15 17 21 11 12 12 13 13 27 18 7 40 17 12 11 13 17 13 22 16 40 27 12 12 17 19
GO:0000049 tRNA binding 448 31 15 17 15 16 16 11 13 10 12 14 12 10 13 22 13 9 27 11 17 14 15 12 13 14 18 17 15 12 10 21 14
GO:0003747 translation release factor activity 386 31 14 12 10 14 11 7 8 11 5 13 16 14 13 21 13 7 25 10 14 5 11 12 11 13 13 16 12 10 11 10 24
GO:0008079 translation termination factor activity 386 31 14 12 10 14 11 7 8 11 5 13 16 14 13 21 13 7 25 10 14 5 11 12 11 13 13 16 12 10 11 10 24
GO:0042162 telomeric DNA binding 332 31 15 14 7 19 8 10 10 6 3 14 8 12 9 24 14 4 12 11 12 5 8 7 9 17 7 17 10 9 15 9 7
GO:0008312 7S RNA binding 311 31 14 10 8 17 7 7 6 6 6 10 7 9 9 19 9 6 19 10 10 5 8 12 6 13 16 14 14 6 8 7 13
GO:0017069 snRNA binding 308 31 9 9 6 13 8 8 9 7 4 7 8 8 8 19 12 6 23 12 20 2 10 5 7 15 6 21 15 7 6 7 11
GO:0016149 translation release factor activity, codon specific 292 31 10 8 8 11 9 5 6 10 4 11 8 12 10 16 8 6 23 8 12 4 9 9 8 10 6 9 9 8 9 8 18
GO:0008327 methyl-CpG binding 233 30 10 20 5 12 9 5 5 5 2 10 8 4 8 9 9 5 7 8 12 0 4 4 7 8 6 9 12 8 11 6 5
GO:0000339 RNA cap binding 217 31 6 6 6 11 8 7 6 5 4 6 7 8 6 9 9 7 13 7 6 6 5 6 6 9 6 8 7 6 6 7 8
GO:0031490 chromatin DNA binding 204 31 6 7 7 6 7 4 4 4 2 5 6 6 10 17 8 6 9 7 11 1 7 9 4 7 4 10 9 6 4 4 7
GO:0008097 5S rRNA binding 201 31 5 5 4 8 9 5 4 5 1 4 4 11 14 11 9 2 14 6 5 3 6 7 6 8 6 8 7 3 7 8 6
GO:0010385 double-stranded methylated DNA binding 197 31 10 11 6 6 5 7 6 5 2 9 6 5 7 9 8 4 5 6 9 1 5 6 6 7 6 5 5 7 9 6 8
GO:0035197 siRNA binding 189 30 7 7 5 7 5 5 4 5 2 6 6 7 8 8 7 4 5 6 7 0 10 6 5 7 6 8 8 6 6 5 11
GO:0070717 poly-purine tract binding 188 31 4 14 3 8 3 3 3 3 2 4 3 3 4 7 4 1 5 5 5 2 4 8 3 6 4 59 3 3 4 2 6
GO:0001047 core promoter binding 177 30 11 10 2 7 6 4 4 5 0 9 5 6 4 12 8 3 7 6 8 1 4 6 4 6 5 6 6 5 7 4 6
GO:0003691 double-stranded telomeric DNA binding 175 30 9 8 3 12 4 5 5 3 0 8 4 4 5 12 9 1 8 7 7 1 4 3 5 9 3 10 6 5 9 4 2
GO:0035198 miRNA binding 144 30 3 5 6 5 3 3 4 4 1 3 3 5 4 11 8 3 4 4 7 0 9 5 4 6 4 6 5 4 3 4 8
GO:0008143 poly(A) RNA binding 136 31 4 13 3 8 3 3 3 3 2 4 3 3 4 7 4 1 5 5 5 2 4 8 3 6 4 8 3 3 4 2 6
GO:0000987 core promoter proximal region sequence-specific DNA binding 120 31 4 4 4 4 3 3 4 3 3 3 5 2 4 7 6 4 5 2 4 1 4 2 4 4 4 5 6 3 4 4 5
GO:0001159 core promoter proximal region DNA binding 120 31 4 4 4 4 3 3 4 3 3 3 5 2 4 7 6 4 5 2 4 1 4 2 4 4 4 5 6 3 4 4 5
GO:0008301 DNA binding, bending 102 27 6 5 2 8 2 3 3 2 0 5 2 2 3 8 6 0 6 4 4 0 1 0 3 5 1 4 4 3 6 3 1
GO:0003730 mRNA 3'-UTR binding 97 31 3 5 2 2 2 2 2 2 2 4 2 5 2 4 5 2 3 4 3 2 2 5 2 2 2 12 3 2 4 2 3
GO:0003680 AT DNA binding 94 28 5 6 2 5 2 2 2 3 0 5 2 1 2 6 6 1 4 4 2 0 0 1 2 4 3 9 5 2 5 2 1
GO:0001046 core promoter sequence-specific DNA binding 87 30 7 6 1 5 3 2 2 3 0 5 2 3 2 5 3 1 4 2 5 1 1 2 2 2 2 3 3 2 5 2 1
GO:0030515 snoRNA binding 83 27 5 4 0 3 4 0 1 0 1 4 2 1 1 6 5 1 1 0 2 1 1 5 2 6 2 17 1 3 1 1 2
GO:0048027 mRNA 5'-UTR binding 80 29 3 2 1 5 2 3 2 1 0 2 2 3 2 6 4 2 6 3 2 0 3 4 2 4 1 5 1 2 2 1 4
GO:0003689 DNA clamp loader activity 80 30 4 1 2 1 3 1 2 4 1 4 3 1 2 9 4 0 9 1 1 2 1 4 2 8 1 3 2 1 1 1 1
GO:0000182 rDNA binding 77 29 2 2 3 3 2 3 2 2 0 2 2 8 3 4 3 1 4 3 2 0 3 1 3 4 2 2 2 2 3 2 2
GO:0043047 single-stranded telomeric DNA binding 75 30 4 4 1 5 2 2 2 1 0 4 2 2 2 4 4 2 5 2 2 1 1 2 2 3 2 5 1 2 4 1 1
GO:0017070 U6 snRNA binding 68 31 3 2 1 6 1 1 2 2 1 2 1 2 2 3 2 1 6 2 7 1 2 2 2 4 1 2 1 1 1 1 3
GO:0030623 U5 snRNA binding 68 31 3 2 1 6 1 1 2 2 1 2 1 2 2 3 2 1 6 2 7 1 2 2 2 4 1 2 1 1 1 1 3
GO:0017091 AU-rich element binding 58 28 3 3 1 3 1 1 1 1 0 3 1 2 1 4 3 1 4 4 2 0 1 0 2 2 2 4 1 2 3 1 1
GO:0034046 poly(G) RNA binding 52 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0 0 0
GO:0036002 pre-mRNA binding 48 30 2 1 2 2 1 1 1 3 1 1 1 1 1 3 2 0 5 1 1 1 1 1 1 2 1 3 3 1 1 2 1
GO:0001164 RNA polymerase I CORE element sequence-specific DNA binding 47 29 4 3 1 1 2 1 1 1 0 2 1 2 1 2 1 0 3 1 4 1 1 2 1 1 1 2 2 1 2 1 1
GO:0001163 RNA polymerase I regulatory region sequence-specific DNA binding 47 29 4 3 1 1 2 1 1 1 0 2 1 2 1 2 1 0 3 1 4 1 1 2 1 1 1 2 2 1 2 1 1
GO:0080084 5S rDNA binding 47 28 1 1 2 2 1 2 1 1 0 1 1 7 2 2 2 0 3 2 1 0 2 1 2 2 1 1 1 1 2 1 1
GO:0001013 RNA polymerase I regulatory region DNA binding 47 29 4 3 1 1 2 1 1 1 0 2 1 2 1 2 1 0 3 1 4 1 1 2 1 1 1 2 2 1 2 1 1
GO:0097157 pre-mRNA intronic binding 46 30 2 1 2 2 1 1 1 3 1 1 1 1 1 3 2 0 5 1 1 1 1 1 1 2 1 1 3 1 1 2 1
GO:0030619 U1 snRNA binding 45 29 1 2 1 2 2 2 2 0 1 1 2 1 1 2 1 1 2 3 1 0 1 1 1 2 1 2 4 1 1 1 2
GO:0030620 U2 snRNA binding 44 29 1 1 1 2 2 2 2 0 1 1 2 1 1 2 1 1 2 3 1 0 1 1 1 2 1 2 4 1 1 1 2
GO:0097100 supercoiled DNA binding 41 28 3 2 1 3 1 1 1 1 0 3 1 1 2 1 1 1 3 1 3 0 1 1 1 1 1 1 1 1 2 1 0
GO:0000340 RNA 7-methylguanosine cap binding 40 30 1 1 1 3 1 1 1 1 1 1 1 1 1 2 2 1 3 2 1 1 1 0 1 2 1 3 1 1 1 1 1
GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding 31 25 2 2 0 3 1 1 1 1 0 2 1 1 1 1 1 1 1 1 1 0 0 0 1 1 1 1 1 1 2 1 0
GO:0090079 translation regulator activity, nucleic acid binding 31 24 1 4 1 2 1 1 1 1 0 1 0 1 1 2 1 1 2 1 2 0 0 0 1 1 0 1 0 1 1 1 1
GO:0001158 enhancer sequence-specific DNA binding 31 25 1 1 1 2 1 1 1 1 0 1 1 1 1 4 1 1 1 2 1 0 0 0 1 2 1 0 1 1 1 1 0
GO:0001012 RNA polymerase II regulatory region DNA binding 31 25 2 2 0 3 1 1 1 1 0 2 1 1 1 1 1 1 1 1 1 0 0 0 1 1 1 1 1 1 2 1 0
GO:0035326 enhancer binding 31 25 1 1 1 2 1 1 1 1 0 1 1 1 1 4 1 1 1 2 1 0 0 0 1 2 1 0 1 1 1 1 0
GO:0000900 translation repressor activity, nucleic acid binding 31 24 1 4 1 2 1 1 1 1 0 1 0 1 1 2 1 1 2 1 2 0 0 0 1 1 0 1 0 1 1 1 1
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding 31 25 2 2 0 3 1 1 1 1 0 2 1 1 1 1 1 1 1 1 1 0 0 0 1 1 1 1 1 1 2 1 0
GO:0070883 pre-miRNA binding 30 30 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0070878 primary miRNA binding 30 30 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0070180 LSU rRNA binding 30 29 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0032137 guanine/thymine mispair binding 9 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0
GO:0000217 DNA secondary structure binding 6 2 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
GO:0070181 SSU rRNA binding 5 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0
GO:0032135 DNA insertion or deletion binding 5 1 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000400 four-way junction DNA binding 4 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0003688 DNA replication origin binding 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 0 0
GO:0070361 mitochondrial light strand promoter anti-sense binding 4 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0032138 single base insertion or deletion binding 4 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0034511 U3 snoRNA binding 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0
GO:0000404 loop DNA binding 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0030627 pre-mRNA 5'-splice site binding 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0
GO:0033592 RNA strand annealing activity 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
GO:0000403 Y-form DNA binding 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0000405 bubble DNA binding 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
GO:0032356 oxidized DNA binding 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
GO:0000406 double-strand/single-strand DNA junction binding 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0032357 oxidized purine DNA binding 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
GO:0031492 nucleosomal DNA binding 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0034512 box C/D snoRNA binding 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0