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Gene
GO/InterPro/MapMan description
Binding site description/sequence
Gene family
GO ID
MapMan ID
TF family
All species
Amborella trichopoda
Arabidopsis lyrata
Arabidopsis thaliana
Beta vulgaris
Brassica rapa
Capsella rubella
Carica papaya
Chlamydomonas reinhardtii
Citrullus lanatus
Citrus sinensis
Cucumis melo
Eucalyptus grandis
Fragaria vesca
Glycine max
Gossypium raimondii
Lotus japonicus
Malus domestica
Manihot esculenta
Medicago truncatula
Oryza sativa ssp. japonica
Ostreococcus lucimarinus
Physcomitrella patens
Populus trichocarpa
Prunus persica
Ricinus communis
Solanum lycopersicum
Solanum tuberosum
Thellungiella parvula
Theobroma cacao
Vitis vinifera
Zea mays
Dicots PLAZA 3.0
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Active versions
pico-PLAZA 2.0
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Monocots PLAZA 4.5
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Monocots PLAZA 3.0
Parental GO terms
Original GO term
GO:0000154
Description
rRNA modification
Type
BP
GO
description
genes
species
aly
ath
atr
bra
bvu
cla
cme
cpa
cre
cru
csi
egr
fve
gma
gra
lja
mdo
mes
mtr
olu
osa
ppa
ppe
ptr
rco
sly
stu
tca
tpa
vvi
zma
GO:0008150
biological_process
522964
31
17841
19965
11480
23537
12932
11911
12662
12868
6903
16300
14644
20129
15004
30507
21275
8644
34226
17438
22816
4298
21456
13432
15519
22457
14970
18532
19742
14915
14166
14433
17962
GO:0008152
metabolic process
380570
31
12695
15341
8369
16593
9448
8544
9139
9579
5457
11464
10321
14197
11003
21913
15373
6374
24591
12366
15681
3427
17139
9974
11429
16107
11047
13881
14206
11080
9948
10524
13360
GO:0009987
cellular process
379541
31
13096
16255
7888
17477
9606
8617
9270
9605
5574
12080
10473
13888
10618
22379
15819
6421
24347
12471
15494
3463
15867
10369
10643
16560
10498
13124
13357
10777
10458
10043
13004
GO:0071704
organic substance metabolic process
317683
31
10887
14031
6650
14294
7868
7160
7686
8063
4666
9846
8362
11402
9161
18364
12774
5363
20108
10351
12855
2891
14791
8352
9534
13277
8892
11485
11196
9274
8578
8453
11069
GO:0044238
primary metabolic process
298650
31
10221
13115
6236
13371
7366
6696
7214
7597
4274
9229
7907
10568
8571
17310
11983
5024
18890
9711
12096
2741
14299
7865
9004
12477
8329
10852
10492
8755
8023
7925
10509
GO:0044237
cellular metabolic process
285282
31
9727
13058
5856
12954
7195
6389
6936
7309
4455
8923
7425
10086
7930
16458
11754
4882
18014
9260
11455
2752
13344
7804
7707
12076
7950
9971
10071
8321
7711
7528
9981
GO:0043170
macromolecule metabolic process
228775
31
7940
10413
4620
10260
5533
4957
5418
5829
3266
7179
5987
7997
6618
13142
9157
3806
14056
7244
9346
2071
12164
5792
7107
9424
6225
8524
7903
6870
6086
5844
7997
GO:0044260
cellular macromolecule metabolic process
205694
31
7116
9643
4053
9350
5036
4481
4915
5303
2985
6535
5369
7220
5777
11927
8386
3466
12778
6575
8363
1860
10892
5306
5621
8624
5640
7223
7155
6217
5487
5199
7192
GO:0006807
nitrogen compound metabolic process
141802
31
4647
6770
2845
6246
3701
3272
3577
3980
2413
4406
3451
4159
3971
8204
5703
2631
8060
4415
5506
1438
8362
3765
3848
5605
4214
5130
4781
4477
3918
3517
4790
GO:1901360
organic cyclic compound metabolic process
136666
31
4421
6756
2636
5977
3507
3115
3408
3809
2225
4286
3307
4157
3876
7936
5584
2528
7631
4230
5357
1326
8144
3444
3713
5534
4000
4996
4706
4432
3756
3383
4486
GO:0006725
cellular aromatic compound metabolic process
131945
31
4302
6469
2557
5774
3404
3019
3298
3699
2157
4092
3169
3904
3730
7647
5363
2457
7359
4102
5213
1286
8067
3363
3618
5267
3857
4807
4443
4256
3634
3251
4381
GO:0034641
cellular nitrogen compound metabolic process
128361
31
4213
6200
2519
5662
3341
2923
3209
3646
2013
4010
3081
3680
3597
7459
5176
2386
7174
3992
5045
1284
7956
3291
3510
5096
3800
4696
4328
4132
3554
3094
4294
GO:0046483
heterocycle metabolic process
128029
31
4178
6160
2496
5609
3324
2920
3216
3632
2015
3967
3082
3684
3603
7450
5178
2371
7176
3986
5038
1290
7954
3284
3505
5089
3784
4679
4310
4134
3527
3098
4290
GO:0006139
nucleobase-containing compound metabolic process
117990
31
3821
5640
2258
5132
3052
2644
2932
3363
1822
3642
2823
3320
3325
6922
4822
2183
6540
3656
4694
1136
7678
2980
3243
4704
3472
4379
3959
3852
3214
2825
3957
GO:0090304
nucleic acid metabolic process
102500
31
3321
4852
1928
4422
2591
2296
2562
2922
1443
3178
2417
2834
2931
5999
4112
1963
5525
3145
4174
930
7209
2474
2852
4026
2968
3862
3455
3486
2817
2427
3379
GO:0010467
gene expression
97737
31
3490
5407
1985
4799
2565
2344
2433
2902
953
3152
2472
2865
2727
5896
4434
1614
5858
3253
3716
920
2968
2715
2615
4171
2910
3694
3379
2517
2826
2476
3681
GO:0016070
RNA metabolic process
77842
31
2811
4262
1541
3833
2066
1896
1939
2430
724
2606
1999
2328
2173
4794
3498
1299
4512
2646
2928
655
2318
1930
2147
3345
2418
2990
2623
2048
2321
1958
2804
GO:0043412
macromolecule modification
71519
31
2188
3569
1474
2993
1710
1510
1608
1646
1129
2054
2224
3447
2021
4184
2868
1069
5117
2449
3019
573
2675
1680
2041
3328
1887
2295
2544
1985
1806
1977
2449
GO:0071840
cellular component organization or biogenesis
59506
31
1955
4434
1329
2742
1615
1462
1532
1564
853
1935
1473
1683
1645
3610
2307
1078
3306
1918
2646
580
1707
1714
1561
2408
1493
2051
2100
1517
1791
1507
1990
GO:0044085
cellular component biogenesis
21045
31
688
1691
492
932
565
497
508
553
433
633
508
577
592
1137
824
345
1273
666
847
259
603
684
532
843
536
715
721
517
582
536
756
GO:0006396
RNA processing
14546
31
468
1104
370
540
480
354
370
412
267
423
359
445
434
755
517
250
875
415
511
279
429
404
407
574
379
577
501
377
378
391
501
GO:0034660
ncRNA metabolic process
7899
31
268
531
200
293
232
180
197
244
187
247
187
228
237
409
310
131
556
204
269
191
238
228
198
308
224
279
247
206
187
234
249
GO:0034470
ncRNA processing
5128
31
147
430
125
173
155
123
134
152
121
154
119
153
131
269
195
87
327
131
166
134
152
143
126
205
134
209
178
136
122
143
154
GO:0022613
ribonucleoprotein complex biogenesis
3981
31
120
496
96
162
124
95
103
113
79
115
89
96
102
200
120
62
273
102
114
80
111
129
102
152
92
119
112
86
96
100
141
GO:0009451
RNA modification
3449
31
111
462
76
121
99
88
88
100
72
113
79
100
88
177
115
45
207
94
101
79
94
80
83
128
88
85
94
96
97
92
97
GO:0042254
ribosome biogenesis
3441
31
97
470
83
135
110
82
89
98
72
97
76
81
88
171
101
54
233
82
98
73
95
108
86
125
79
102
95
73
79
88
121
GO:0016072
rRNA metabolic process
2445
31
69
358
62
80
79
58
62
77
68
72
52
62
64
119
69
39
156
55
61
50
75
61
63
87
59
73
67
56
54
64
74
GO:0006364
rRNA processing
2259
31
60
351
56
72
72
54
58
74
52
65
47
57
60
108
63
35
149
50
55
49
65
58
59
80
53
68
62
51
49
59
68
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