Anchorpoints

Gene id
VV19G01870
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV12G02860name=GSVIVG01020705001;chr12-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G15710No description available.scaffold_3+View
AL1G48400No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G14940phosphoenolpyruvate carboxylase 3 phosphoenolpyruvate carboxylase 3 (PPC3); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6864 Blast hits to 6805 proteins in 1910 species: Archae - 27; Bacteria - 2657; Metazoa - 5; Fungi - 0; Plants - 1758; Viruses - 0; Other Eukaryotes - 2417 (source: NCBI BLink). Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.3+View
AT1G53310phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 6864 Blast hits to 6795 proteins in 1908 species: Archae - 27; Bacteria - 2661; Metazoa - 3; Fungi - 0; Plants - 1763; Viruses - 0; Other Eukaryotes - 2410 (source: NCBI BLink). phosphoenolpyruvate carboxylase 1 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G28100No description available.A05-View
BR03G34200No description available.A03+View
BR08G01380No description available.A08+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G15760No description available.Bvchr4.sca012-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00081G00520No description available.CM3.5_scaffold00081+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00097G01010No description available.supercontig_97-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G40550No description available.scaffold_1-View
CRU_003G13880No description available.scaffold_3+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G10000No description available.scaffold_6-View
EG0001G15860No description available.scaffold_1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G18530Phosphoenolpyruvate carboxylase, housekeeping isozyme (PEPCase) (putative)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G33820No description available.Gm12-View
GM12G35840Phosphoenolpyruvate carboxylaseGm12-View
GM06G43050No description available.Gm06+View
GM13G34560No description available.Gm13+View
GM13G36670No description available.Gm13+View
GM06G33380No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G06140No description available.Chr02+View
GR13G17350No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G004570No description available.chr3+View
LJ3G016540No description available.chr3-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G021040No description available.3-View
MD11G023660No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02610G00110No description available.scaffold02610-View
ME03741G00370No description available.scaffold03741+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G079860phosphoenolpyruvate carboxylasechr4-View
MT2G092930phosphoenolpyruvate carboxylasechr2-View
MT2G076670phosphoenolpyruvate carboxylasechr2+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G11054phosphoenolpyruvate carboxylase, putative, expressed1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G15880No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G39190No description available.Chr01+View
PT11G11070No description available.Chr11+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G062530Phosphoenolpyruvate carboxylase 2 (AHRD V1 ***- Q9SCB2_SOLLC)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech07+View
SL12G014250Phosphoenolpyruvate carboxylase 1 (AHRD V1 ***- Q9SCB3_SOLLC)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech12-View
SL10G007290Phosphoenolpyruvate carboxylase (AHRD V1 ***- A6YM32_RICCO)%3B contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase%2C catalytic core IPR001449 Phosphoenolpyruvate carboxylasech10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G024710Phosphoenolpyruvate carboxylase 2 (AHRD V1 ***- Q9SCB2_SOLLC); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylasechr07-View
ST10G007910Phosphoenolpyruvate carboxylase (AHRD V1 ***- A6YM32_RICCO); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylasechr10+View
ST12G005140Phosphoenolpyruvate carboxylase 1 (AHRD V1 ***- Q9SCB3_SOLLC); contains Interpro domain(s) IPR015813 Pyruvate/Phosphoenolpyruvate kinase, catalytic core IPR001449 Phosphoenolpyruvate carboxylase Phosphoenolpyruvate carboxylasechr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G10200No description available.scaffold_7-View
TC0001G14630No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G24740similar to AT2G42600|ATPPC2 (PHOSPHOENOLPYRUVATE CARBOXYLASE 2)ch4-6-View
TP1G39890similar to AT1G53310|ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1)ch1-2-View
TP3G13150similar to AT3G14940|ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)ch3-1+View


Download

Gene id
Species
Description
Chromosome
Strand