Anchorpoints

Gene id
VV14G02960
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV17G02960name=GSVIVG01007910001;chr17-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G15310No description available.scaffold_6-View
AL3G01110No description available.scaffold_3-View
AL5G09060No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G39320UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13476 Blast hits to 13452 proteins in 2147 species: Archae - 313; Bacteria - 7039; Metazoa - 213; Fungi - 97; Plants - 213; Viruses - 14; Other Eukaryotes - 5587 (source: NCBI BLink). UDP-glucose 6-dehydrogenase family protein5+View
AT3G29360UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 13454 Blast hits to 13430 proteins in 2148 species: Archae - 313; Bacteria - 7048; Metazoa - 213; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5554 (source: NCBI BLink). Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein3-View
AT3G01010UDP-glucose/GDP-mannose dehydrogenase family protein UDP-glucose/GDP-mannose dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G15490.1); Has 4547 Blast hits to 4540 proteins in 1270 species: Archae - 101; Bacteria - 2703; Metazoa - 193; Fungi - 72; Plants - 179; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink).3+View
AT5G15490UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, cell wall, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13373 Blast hits to 13344 proteins in 2170 species: Archae - 309; Bacteria - 7111; Metazoa - 214; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5413 (source: NCBI BLink).5-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00110G00380No description available.scaffold00110+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G31690No description available.A06+View
BR10G19610No description available.A10+View
BR03G06420No description available.A03-View
BR02G07470No description available.A02-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G00050No description available.Bvchr5.sca022+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G16350No description available.Chr6-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G01610No description available.supercontig_14-View
CP00001G01050No description available.supercontig_1-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G07490No description available.scaffold_5-View
CRU_007G35310No description available.scaffold_7-View
CRU_003G01100No description available.scaffold_3-View
CRU_006G13320No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00015G02400No description available.scaffold00015-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G12050No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G12500UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (putative)LG5+View
FV0G04440Probable UDP-glucose 6-dehydrogenase 1 (UDP-Glc dehydrogenase 1) (putative)scf0513158+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G03500No description available.Gm19-View
GM20G03221No description available.Gm20+View
GM08G26520UDP-glucose 6-dehydrogenase 1Gm08-View
GM05G00590No description available.Gm05+View
GM18G50000UDP-glucose 6-dehydrogenase 1Gm18-View
GM13G06050No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G08180No description available.Chr07-View
GR05G14470No description available.Chr05-View
GR13G09260No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G017610No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G004120No description available.13+View
MD14G019880No description available.14-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06609G00370No description available.scaffold06609+View
ME12794G02660No description available.scaffold12794-View
ME08359G01790No description available.scaffold08359+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G012950UDP-glucose 6-dehydrogenase family proteinchr7-View
MT5G043970UDP-glucose 6-dehydrogenase family proteinchr5-View
MT6G014530UDP-glucose 6-dehydrogenase C putativechr6-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G29580No description available.scaffold_1-View
PPE_005G20670No description available.scaffold_5-View
PPE_003G23690No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G11860No description available.Chr04-View
PT17G09200No description available.Chr17-View
PT08G09430No description available.Chr08+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G01730No description available.30138+View
RC30174G05220No description available.30174+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G088690UDP-glucose 6-dehydrogenase (AHRD V1 **** B6TBY8_MAIZE)%3B contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase%2C N-terminalch02-View
SL03G115380UDP-glucose dehydrogenase (AHRD V1 **** B1N754_EUCGR)%3B contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation and substrate-bindingch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G012920UDP-D-glucose dehydrogenase (AHRD V1 ***- D2WK25_GOSHI); contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-bindingchr02-View
ST03G028860UDP-glucose dehydrogenase (AHRD V1 ***- B1N754_EUCGR); contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-bindingchr03+View
ST02G034190UDP-glucose 6-dehydrogenase (AHRD V1 ***- B6TBY8_MAIZE); contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminalchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G10080No description available.scaffold_3-View
TC0004G09670No description available.scaffold_4-View
TC0002G33270No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G02670similar to AT5G39320|UDP-glucose 6-dehydrogenase, putativech7-1-View
TP2G17950similar to AT3G29360|UDP-glucose 6-dehydrogenase, putativech2-4-View
TP6G28610similar to AT5G15490|UDP-glucose 6-dehydrogenase, putativech6-6+View
TP3G01120similar to AT5G15490|UDP-glucose 6-dehydrogenase, putativech3-1-View


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Gene id
Species
Description
Chromosome
Strand