Anchorpoints
- Gene id
- VV08G11440
- Organism
- Vitis vinifera
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G08370 | name=GSVIVG01031404001; | chr6 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G03010 | No description available. | scaffold_6 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G03740 | HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression histone deacetylase 2C (HD2C); FUNCTIONS IN: histone deacetylase activity, transcription repressor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2); Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111; Bacteria - 17827; Metazoa - 12467; Fungi - 4889; Plants - 1882; Viruses - 518; Other Eukaryotes - 9855 (source: NCBI BLink). histone deacetylase 2C | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G27780 | No description available. | A10 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G18280 | No description available. | Bvchr7.sca002 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G17470 | No description available. | Chr10 | + | View |
CL02G21930 | No description available. | Chr2 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00011G03600 | No description available. | CM3.5_scaffold00011 | - | View |
CM00047G03330 | No description available. | CM3.5_scaffold00047 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00005G00820 | No description available. | supercontig_5 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G08400 | No description available. | scaffold_4 | + | View |
CRU_006G02620 | No description available. | scaffold_6 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00056G00290 | No description available. | scaffold00056 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G03710 | No description available. | scaffold_10 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G19240 | Histone deacetylase HDT1 (HD2a) (probable) | LG6 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G19480 | No description available. | Gm11 | + | View |
GM03G34850 | No description available. | Gm03 | - | View |
GM19G37540 | No description available. | Gm19 | - | View |
GM12G09000 | Histone deacetylase HDT1 | Gm12 | - | View |
GM12G30600 | No description available. | Gm12 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR02G24280 | No description available. | Chr02 | + | View |
GR06G10930 | No description available. | Chr06 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G011640 | No description available. | 11 | + | View |
MD12G001680 | No description available. | 12 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05859G00250 | No description available. | scaffold05859 | - | View |
ME11179G00140 | No description available. | scaffold11179 | - | View |
ME03569G00050 | No description available. | scaffold03569 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G084815 | histone deacetylase 2a C putative | chr2 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G14060 | No description available. | scaffold_7 | + | View |
PPE_006G11610 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT04G18880 | No description available. | Chr04 | + | View |
PT06G11650 | No description available. | Chr06 | + | View |
PT09G14940 | No description available. | Chr09 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29991G00240 | No description available. | 29991 | - | View |
RC29092G00080 | No description available. | 29092 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G066840 | Histone deacetylase-like protein (AHRD V1 *-*- Q3HVL4_SOLTU) | ch11 | - | View |
SL10G085560 | Histone deacetylase 2a-like (AHRD V1 ***- Q2XTE1_SOLTU)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-type | ch10 | - | View |
SL09G009030 | Histone deacetylase 2a-like (AHRD V1 **** Q2XTE1_SOLTU)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-type | ch09 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST11G024650 | Histone deacetylase-like protein-like (AHRD V1 ***- Q2XTD2_SOLTU) | chr11 | - | View |
ST09G011250 | Histone deacetylase 2a-like (AHRD V1 **** Q2XTE1_SOLTU); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type | chr09 | + | View |
ST10G022910 | Histone deacetylase (AHRD V1 **** B9MTN7_POPTR); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type | chr10 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G07730 | No description available. | scaffold_5 | - | View |
TC0009G28740 | No description available. | scaffold_9 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G38980 | similar to AT5G03740|HD2C (HISTONE DEACETYLASE 2C) | ch6-6 | - | View |
TP4G10680 | similar to AT2G27840|HDT4 | ch4-6 | + | View |