Anchorpoints

Gene id
VV08G11440
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV06G08370name=GSVIVG01031404001;chr6-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G03010No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G03740HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression histone deacetylase 2C (HD2C); FUNCTIONS IN: histone deacetylase activity, transcription repressor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to water deprivation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: nucleolus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2); Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111; Bacteria - 17827; Metazoa - 12467; Fungi - 4889; Plants - 1882; Viruses - 518; Other Eukaryotes - 9855 (source: NCBI BLink). histone deacetylase 2C5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G27780No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G18280No description available.Bvchr7.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G17470No description available.Chr10+View
CL02G21930No description available.Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G03600No description available.CM3.5_scaffold00011-View
CM00047G03330No description available.CM3.5_scaffold00047+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00005G00820No description available.supercontig_5+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G08400No description available.scaffold_4+View
CRU_006G02620No description available.scaffold_6+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00056G00290No description available.scaffold00056-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G03710No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G19240Histone deacetylase HDT1 (HD2a) (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G19480No description available.Gm11+View
GM03G34850No description available.Gm03-View
GM19G37540No description available.Gm19-View
GM12G09000Histone deacetylase HDT1Gm12-View
GM12G30600No description available.Gm12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G24280No description available.Chr02+View
GR06G10930No description available.Chr06-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G011640No description available.11+View
MD12G001680No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05859G00250No description available.scaffold05859-View
ME11179G00140No description available.scaffold11179-View
ME03569G00050No description available.scaffold03569-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G084815histone deacetylase 2a C putativechr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G14060No description available.scaffold_7+View
PPE_006G11610No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G18880No description available.Chr04+View
PT06G11650No description available.Chr06+View
PT09G14940No description available.Chr09+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29991G00240No description available.29991-View
RC29092G00080No description available.29092-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066840Histone deacetylase-like protein (AHRD V1 *-*- Q3HVL4_SOLTU)ch11-View
SL10G085560Histone deacetylase 2a-like (AHRD V1 ***- Q2XTE1_SOLTU)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech10-View
SL09G009030Histone deacetylase 2a-like (AHRD V1 **** Q2XTE1_SOLTU)%3B contains Interpro domain(s) IPR007087 Zinc finger%2C C2H2-typech09-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G024650Histone deacetylase-like protein-like (AHRD V1 ***- Q2XTD2_SOLTU)chr11-View
ST09G011250Histone deacetylase 2a-like (AHRD V1 **** Q2XTE1_SOLTU); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr09+View
ST10G022910Histone deacetylase (AHRD V1 **** B9MTN7_POPTR); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-typechr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G07730No description available.scaffold_5-View
TC0009G28740No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G38980similar to AT5G03740|HD2C (HISTONE DEACETYLASE 2C)ch6-6-View
TP4G10680similar to AT2G27840|HDT4ch4-6+View


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Gene id
Species
Description
Chromosome
Strand