Anchorpoints

Gene id
VV07G05290
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
VV03G06470name=GSVIVG01031717001;chr3+View
VV18G06900name=GSVIVG01009466001;chr18+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G33400No description available.scaffold_8+View
AL7G07020No description available.scaffold_7+View
AL3G35130No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G67120RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View
AT4G34040RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G15530.3); Has 8873 Blast hits to 7809 proteins in 315 species: Archae - 0; Bacteria - 89; Metazoa - 2441; Fungi - 580; Plants - 3871; Viruses - 41; Other Eukaryotes - 1851 (source: NCBI BLink). RING/U-box superfamily protein4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G11360No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G15730No description available.Chr8-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G01940No description available.CM3.5_scaffold00014+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00021G01720No description available.supercontig_21+View
CP00055G01260No description available.supercontig_55+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G06020No description available.scaffold_7+View
CRU_008G26550No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G01930No description available.scaffold00006+View
CS00002G02710No description available.scaffold00002+View
CS00065G00310No description available.scaffold00065-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G08920No description available.scaffold_9+View
EG0006G01780No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G33580E3 ubiquitin-protein ligase arkadia-A (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G35940No description available.Gm17+View
GM06G04410No description available.Gm06-View
GM02G11515No description available.Gm02-View
GM07G33770No description available.Gm07-View
GM17G19315No description available.Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G02150No description available.Chr10+View
GR07G21490No description available.Chr07-View
GR13G04520No description available.Chr13-View
GR08G07740No description available.Chr08-View
GR09G21390No description available.Chr09-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03484G00280No description available.scaffold03484+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G019200zinc finger (C3HC4-type RING finger) family proteinchr1+View
MT4G085630RING zinc finger protein C putativechr4+View
MT5G016920zinc finger C C3HC4 type (RING finger) proteinchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G43780No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G10010No description available.Chr09+View
PT07G04550No description available.Chr07-View
PT01G30490No description available.Chr01+View
PT02G12430No description available.Chr02+View
PT05G13990No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30115G00620No description available.30115-View
RC30170G01970No description available.30170+View
RC29801G01050No description available.29801+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G088740RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12+View
SL01G107930RING-finger protein like (AHRD V1 *-*- B6SVN2_MAIZE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G045080Zinc/RING finger protein 3 (AHRD V1 *-*- ZNRF3_MOUSE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr01+View
ST04G031620Zinc finger protein (AHRD V1 ***- Q00M69_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04+View
ST12G026890Zinc finger protein (AHRD V1 ***- Q00M69_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G05620No description available.scaffold_1-View
TC0008G00380No description available.scaffold_8+View
TC0002G09890No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G31770similar to AT4G34040|zinc finger (C3HC4-type RING finger) family proteinch7-5-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G05220protein binding protein1-View


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Gene id
Species
Description
Chromosome
Strand