Anchorpoints
- Gene id
- VV07G05290
- Organism
- Vitis vinifera
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G06470 | name=GSVIVG01031717001; | chr3 | + | View |
VV18G06900 | name=GSVIVG01009466001; | chr18 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G33400 | No description available. | scaffold_8 | + | View |
AL7G07020 | No description available. | scaffold_7 | + | View |
AL3G35130 | No description available. | scaffold_3 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G67120 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
AT4G34040 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G15530.3); Has 8873 Blast hits to 7809 proteins in 315 species: Archae - 0; Bacteria - 89; Metazoa - 2441; Fungi - 580; Plants - 3871; Viruses - 41; Other Eukaryotes - 1851 (source: NCBI BLink). RING/U-box superfamily protein | 4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G11360 | No description available. | A07 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G15730 | No description available. | Chr8 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00014G01940 | No description available. | CM3.5_scaffold00014 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00021G01720 | No description available. | supercontig_21 | + | View |
CP00055G01260 | No description available. | supercontig_55 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G06020 | No description available. | scaffold_7 | + | View |
CRU_008G26550 | No description available. | scaffold_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00006G01930 | No description available. | scaffold00006 | + | View |
CS00002G02710 | No description available. | scaffold00002 | + | View |
CS00065G00310 | No description available. | scaffold00065 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0009G08920 | No description available. | scaffold_9 | + | View |
EG0006G01780 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G33580 | E3 ubiquitin-protein ligase arkadia-A (probable) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G35940 | No description available. | Gm17 | + | View |
GM06G04410 | No description available. | Gm06 | - | View |
GM02G11515 | No description available. | Gm02 | - | View |
GM07G33770 | No description available. | Gm07 | - | View |
GM17G19315 | No description available. | Gm17 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G02150 | No description available. | Chr10 | + | View |
GR07G21490 | No description available. | Chr07 | - | View |
GR13G04520 | No description available. | Chr13 | - | View |
GR08G07740 | No description available. | Chr08 | - | View |
GR09G21390 | No description available. | Chr09 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME03484G00280 | No description available. | scaffold03484 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G019200 | zinc finger (C3HC4-type RING finger) family protein | chr1 | + | View |
MT4G085630 | RING zinc finger protein C putative | chr4 | + | View |
MT5G016920 | zinc finger C C3HC4 type (RING finger) protein | chr5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G43780 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G10010 | No description available. | Chr09 | + | View |
PT07G04550 | No description available. | Chr07 | - | View |
PT01G30490 | No description available. | Chr01 | + | View |
PT02G12430 | No description available. | Chr02 | + | View |
PT05G13990 | No description available. | Chr05 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30115G00620 | No description available. | 30115 | - | View |
RC30170G01970 | No description available. | 30170 | + | View |
RC29801G01050 | No description available. | 29801 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G088740 | RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch12 | + | View |
SL01G107930 | RING-finger protein like (AHRD V1 *-*- B6SVN2_MAIZE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G045080 | Zinc/RING finger protein 3 (AHRD V1 *-*- ZNRF3_MOUSE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr01 | + | View |
ST04G031620 | Zinc finger protein (AHRD V1 ***- Q00M69_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr04 | + | View |
ST12G026890 | Zinc finger protein (AHRD V1 ***- Q00M69_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr12 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G05620 | No description available. | scaffold_1 | - | View |
TC0008G00380 | No description available. | scaffold_8 | + | View |
TC0002G09890 | No description available. | scaffold_2 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G31770 | similar to AT4G34040|zinc finger (C3HC4-type RING finger) family protein | ch7-5 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G05220 | protein binding protein | 1 | - | View |