Anchorpoints

Gene id
VV07G05130
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G03510No description available.scaffold_7+View
AL8G33330No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36920Integrase-type DNA-binding superfamily protein APETALA 2 (AP2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: target of early activation tagged (EAT) 3 (TAIR:AT5G67180.1); Has 8542 Blast hits to 5152 proteins in 275 species: Archae - 0; Bacteria - 58; Metazoa - 3; Fungi - 0; Plants - 8374; Viruses - 7; Other Eukaryotes - 100 (source: NCBI BLink). Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.4+View
AT5G67180target of early activation tagged (EAT) 3 target of early activation tagged (EAT) 3 (TOE3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G36920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G01610No description available.A01+View
BR03G55720No description available.A03-View
BR07G11310No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G17030No description available.Chr1+View
CL02G12520No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00045G01320No description available.CM3.5_scaffold00045+View
CM00007G06000No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G01140No description available.supercontig_55+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G26490No description available.scaffold_8+View
CRU_007G02880No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G01840No description available.scaffold00006+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G17930Floral homeotic protein APETALA 2 (probable)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G05720No description available.Gm11+View
GM17G18640No description available.Gm17+View
GM05G18041No description available.Gm05+View
GM01G39520No description available.Gm01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G07780No description available.Chr08-View
GR03G02590No description available.Chr03-View
GR11G10620No description available.Chr11-View
GR07G21590No description available.Chr07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G022410No description available.15-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06484G00110No description available.scaffold06484+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G016810AP2 domain transcription factorchr5+View
MT4G094868AP2 domain transcription factorchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G55970AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G24080No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G04620No description available.Chr07+View
PT05G14070No description available.Chr05+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G093150AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch02+View
SL03G044300AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G010160AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *--- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr03-View
ST02G011680AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *--- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr02+View
ST02G031630AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *--- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-bindingchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G05770No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G34850similar to AT4G36920|AP2 (APETALA 2)ch7-6-View
TP2G29490similar to AT5G67180|AP2 domain-containing transcription factor, putativech2-4+View


Download

Gene id
Species
Description
Chromosome
Strand