Anchorpoints

Gene id
VV06G07930
Organism
Vitis vinifera

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G13770No description available.scaffold_3+View
AL1G50100No description available.scaffold_1-View
AL8G21820No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G13228RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G18760.1); Has 5838 Blast hits to 5825 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 1731; Fungi - 340; Plants - 2980; Viruses - 20; Other Eukaryotes - 767 (source: NCBI BLink).3+View
AT4G26400RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). RING/U-box superfamily protein4-View
AT5G56340RING/U-box superfamily protein ATCRT1; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT1G55530RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G13430.3); Has 11045 Blast hits to 10950 proteins in 292 species: Archae - 0; Bacteria - 8; Metazoa - 3210; Fungi - 1082; Plants - 5106; Viruses - 41; Other Eukaryotes - 1598 (source: NCBI BLink). RING/U-box superfamily protein1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00119G00660No description available.scaffold00119+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G29530No description available.A05-View
BR08G00480No description available.A08+View
BR10G09640No description available.A10+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G24450No description available.Chr2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00119G00240No description available.supercontig_119+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G41920No description available.scaffold_1-View
CRU_007G13700No description available.scaffold_7+View
CRU_003G12270No description available.scaffold_3+View
CRU_008G16270No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00123G00400No description available.scaffold00123-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G15120No description available.scaffold_10+View
EG0002G29900No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G35820E3 ubiquitin-protein ligase CIP8 (probable)LG3+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G26470No description available.Chr07-View
GR13G11770No description available.Chr13-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G000580No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03614G02490No description available.scaffold03614-View
ME06582G01000No description available.scaffold06582+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G01720No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G00150No description available.Chr01+View
PT13G06050No description available.Chr13-View
PT03G22320No description available.Chr03-View
PT19G03250No description available.Chr19+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28842G00210No description available.28842+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G050040RING finger protein 13 (AHRD V1 *-*- RNF13_CHICK)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G15890No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G11620similar to AT3G13430|zinc finger (C3HC4-type RING finger) family proteinch3-1+View
TP1G41140similar to AT1G55530|zinc finger (C3HC4-type RING finger) family proteinch1-2-View


Download

Gene id
Species
Description
Chromosome
Strand