Anchorpoints

Gene id
TP5G28950
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP1G16030similar to AT1G17970|zinc finger (C3HC4-type RING finger) family proteinch1-1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G18900No description available.scaffold_1+View
AL2G22640No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G73760RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G17970.1); Has 8524 Blast hits to 8508 proteins in 269 species: Archae - 0; Bacteria - 6; Metazoa - 2401; Fungi - 632; Plants - 4276; Viruses - 14; Other Eukaryotes - 1195 (source: NCBI BLink). RING/U-box superfamily protein1-View
AT1G17970RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G73760.1); Has 8802 Blast hits to 8789 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 2364; Fungi - 695; Plants - 4341; Viruses - 10; Other Eukaryotes - 1392 (source: NCBI BLink).1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G29510No description available.A07-View
BR08G26220No description available.A08-View
BR07G20710No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G10730No description available.Chr4-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G02040No description available.CM3.5_scaffold00001+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G04550No description available.supercontig_3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G19350No description available.scaffold_2-View
CRU_001G16900No description available.scaffold_1+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G06890No description available.scaffold_2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G34270No description available.Gm05-View
GM08G05410No description available.Gm08+View
GM07G10930No description available.Gm07+View
GM09G31170No description available.Gm09-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G05850No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G050760No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G021540No description available.14+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G22760No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G04390No description available.Chr15-View
PT12G05380No description available.Chr12-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G118840RING-finger protein like (AHRD V1 *-*- B6SVN2_MAIZE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech03+View
SL12G040390RING-finger protein-like (AHRD V1 *-*- Q5QLR6_ORYSJ)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech12+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G032360RING-finger protein like (AHRD V1 *-*- B6SVN2_MAIZE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G06440name=GSVIVG01008343001;chr17-View


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Gene id
Species
Description
Chromosome
Strand