Anchorpoints

Gene id
TP4G27030
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G32820No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G44950histone mono-ubiquitination 1 The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. histone mono-ubiquitination 1 (HUB1); FUNCTIONS IN: ubiquitin-protein ligase activity, protein homodimerization activity, zinc ion binding; INVOLVED IN: in 10 processes; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 2 (TAIR:AT1G55250.1); Has 39567 Blast hits to 24086 proteins in 1905 species: Archae - 719; Bacteria - 4806; Metazoa - 20260; Fungi - 3821; Plants - 2415; Viruses - 125; Other Eukaryotes - 7421 (source: NCBI BLink).2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00111G00170No description available.scaffold00111+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G26820No description available.A04-View
BR05G04690No description available.A05-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G64670No description available.Bvchr1_un.sca002-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G00470No description available.CM3.5_scaffold00006+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00101G00370No description available.supercontig_101-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G26590No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G00990No description available.scaffold00001-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR04G16510No description available.Chr04+View
GR07G08720No description available.Chr07-View
GR04G03960No description available.Chr04-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04450G00360No description available.scaffold04450+View
ME08265G04640No description available.scaffold08265-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G046250E3 ubiquitin-protein ligase BRE1-like proteinchr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G46450E3 ubiquitin-protein ligase BRE1-like 1 zinc finger, C3HC4 type domain containing protein, expressed4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G12690No description available.scaffold_2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G14130No description available.Chr02-View
PT14G05580No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G00470No description available.30174-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G38360No description available.scaffold_1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G00790name=GSVIVG01018223001;chr15-View


Download

Gene id
Species
Description
Chromosome
Strand