Gene id	Description	Chromosome	Strand	Multiplicon
TP5G03920	similar to AT3G59060|PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)	ch5-1	+	View
TP3G21400	similar to AT3G23690|basic helix-loop-helix (bHLH) family protein	ch3-2	-	View

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL4G30410	No description available.	scaffold_4	+	View
AL5G29640	No description available.	scaffold_5	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT3G59060	phytochrome interacting factor 3-like 6 Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B. phytochrome interacting factor 3-like 6 (PIL6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: red, far-red light phototransduction, ethylene biosynthetic process, circadian rhythm; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 4 (TAIR:AT2G43010.1); Has 4555 Blast hits to 4547 proteins in 305 species: Archae - 0; Bacteria - 0; Metazoa - 974; Fungi - 129; Plants - 3421; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).	3	-	View
AT2G43010	Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB. phytochrome interacting factor 4 (PIF4); CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome interacting factor 3-like 6 (TAIR:AT3G59060.1); Has 4545 Blast hits to 4539 proteins in 356 species: Archae - 0; Bacteria - 0; Metazoa - 939; Fungi - 192; Plants - 3373; Viruses - 2; Other Eukaryotes - 39 (source: NCBI BLink). phytochrome interacting factor 4	2	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR09G38970	No description available.	A09	-	View
BR04G25650	No description available.	A04	+	View
BR03G21310	No description available.	A03	+	View

Capsella rubella

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_005G24440	No description available.	scaffold_5	-	View
CRU_003G22960	No description available.	scaffold_3	-	View
CRU_004G24560	No description available.	scaffold_4	+	View

Eucalyptus grandis

Gene id	Description	Chromosome	Strand	Multiplicon
EG0001G16990	No description available.	scaffold_1	+	View

Glycine max

Gene id	Description	Chromosome	Strand	Multiplicon
GM12G05930	No description available.	Gm12	-	View
GM13G41670	No description available.	Gm13	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR11G14460	No description available.	Chr11	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST09G030150	Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding	chr09	-	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0001G16090	No description available.	scaffold_1	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV05G01410	name=GSVIVG01013553001;	chr5	-	View

Gene id

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Description

Chromosome

Strand