Anchorpoints
- Gene id
- TP3G14990
- Organism
- Thellungiella parvula
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G14470 | similar to AT4G15975|protein binding / zinc ion binding | ch7-4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G17930 | No description available. | scaffold_3 | + | View |
AL7G27540 | No description available. | scaffold_7 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G15975 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: TOXICOS EN LEVADURA 2 (TAIR:AT3G16720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein | 4 | + | View |
AT3G16720 | TOXICOS EN LEVADURA 2 TOXICOS EN LEVADURA 2 (ATL2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G15975.1); Has 9711 Blast hits to 9689 proteins in 300 species: Archae - 0; Bacteria - 2; Metazoa - 2552; Fungi - 813; Plants - 5050; Viruses - 85; Other Eukaryotes - 1209 (source: NCBI BLink). RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 3 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G26660 | No description available. | A05 | - | View |
BR09G09890 | No description available. | A09 | - | View |
BR08G07710 | No description available. | A08 | + | View |
BR01G32460 | No description available. | A01 | - | View |
BR03G34840 | No description available. | A03 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G04760 | No description available. | Chr6 | - | View |
CL05G07020 | No description available. | Chr5 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G07880 | No description available. | CM3.5_scaffold00006 | + | View |
CM00047G01850 | No description available. | CM3.5_scaffold00047 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G15670 | No description available. | scaffold_3 | + | View |
CRU_007G24510 | No description available. | scaffold_7 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00016G00540 | No description available. | scaffold00016 | + | View |
CS00001G07330 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G31870 | No description available. | scaffold_8 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G13740 | RING-H2 finger protein ATL3F (probable) | LG4 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM09G04750 | No description available. | Gm09 | - | View |
GM07G37470 | No description available. | Gm07 | - | View |
GM17G03155 | No description available. | Gm17 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G26110 | No description available. | Chr06 | - | View |
GR02G02870 | No description available. | Chr02 | + | View |
GR01G00770 | No description available. | Chr01 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G015090 | No description available. | 13 | - | View |
MD16G010120 | No description available. | 16 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME01945G00650 | No description available. | scaffold01945 | - | View |
ME04457G00530 | No description available. | scaffold04457 | - | View |
ME01551G03770 | No description available. | scaffold01551 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G436100 | RING-H2 zinc finger protein | chr2 | - | View |
MT4G120270 | RING-H2 zinc finger protein | chr4 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS05G45060 | RING-H2 finger protein ATL2M, putative, expressed | 5 | + | View |
OS03G22080 | RING-H2 finger protein, putative, expressed | 3 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G11630 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G01050 | No description available. | Chr10 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29726G01890 | No description available. | 29726 | + | View |
RC29986G00570 | No description available. | 29986 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G075320 | Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type | ch09 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G020540 | Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G30170 | No description available. | scaffold_1 | + | View |
TC0004G28990 | No description available. | scaffold_4 | + | View |