Anchorpoints

Gene id
TP3G14990
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP7G14470similar to AT4G15975|protein binding / zinc ion bindingch7-4+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G17930No description available.scaffold_3+View
AL7G27540No description available.scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G15975RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: TOXICOS EN LEVADURA 2 (TAIR:AT3G16720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein4+View
AT3G16720TOXICOS EN LEVADURA 2 TOXICOS EN LEVADURA 2 (ATL2); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin, defense response; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G15975.1); Has 9711 Blast hits to 9689 proteins in 300 species: Archae - 0; Bacteria - 2; Metazoa - 2552; Fungi - 813; Plants - 5050; Viruses - 85; Other Eukaryotes - 1209 (source: NCBI BLink). RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G26660No description available.A05-View
BR09G09890No description available.A09-View
BR08G07710No description available.A08+View
BR01G32460No description available.A01-View
BR03G34840No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G04760No description available.Chr6-View
CL05G07020No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G07880No description available.CM3.5_scaffold00006+View
CM00047G01850No description available.CM3.5_scaffold00047-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G15670No description available.scaffold_3+View
CRU_007G24510No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00016G00540No description available.scaffold00016+View
CS00001G07330No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G31870No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G13740RING-H2 finger protein ATL3F (probable)LG4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G04750No description available.Gm09-View
GM07G37470No description available.Gm07-View
GM17G03155No description available.Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G26110No description available.Chr06-View
GR02G02870No description available.Chr02+View
GR01G00770No description available.Chr01-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G015090No description available.13-View
MD16G010120No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01945G00650No description available.scaffold01945-View
ME04457G00530No description available.scaffold04457-View
ME01551G03770No description available.scaffold01551+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G436100RING-H2 zinc finger proteinchr2-View
MT4G120270RING-H2 zinc finger proteinchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G45060RING-H2 finger protein ATL2M, putative, expressed5+View
OS03G22080RING-H2 finger protein, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G11630No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G01050No description available.Chr10-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29726G01890No description available.29726+View
RC29986G00570No description available.29986+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G075320Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-typech09+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G020540Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G30170No description available.scaffold_1+View
TC0004G28990No description available.scaffold_4+View


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Gene id
Species
Description
Chromosome
Strand