Anchorpoints

Gene id
TP3G01350
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP6G28330similar to AT5G15790|zinc finger (C3HC4-type RING finger) family proteinch6-6-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G15620No description available.scaffold_6+View
AL3G01400No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G15790RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02290.1); Has 5281 Blast hits to 5274 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 302; Plants - 2328; Viruses - 9; Other Eukaryotes - 839 (source: NCBI BLink).5+View
AT3G02290RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2); Has 5868 Blast hits to 5858 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 1823; Fungi - 365; Plants - 2709; Viruses - 17; Other Eukaryotes - 952 (source: NCBI BLink). RING/U-box superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G35690No description available.A05-View
BR03G06600No description available.A03+View
BR10G19410No description available.A10-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G08450No description available.Bvchr2.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G13940No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00051G00940No description available.CM3.5_scaffold00051-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G01320No description available.scaffold_3+View
CRU_006G13610No description available.scaffold_6+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G17340No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G42010E3 ubiquitin-protein ligase At3g02290 (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G04340No description available.Gm19-View
GM08G27730No description available.Gm08-View
GM18G50945No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G20710No description available.Chr01+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04043G01700No description available.scaffold04043+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G22810No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G10010No description available.Chr17-View
PT04G11480No description available.Chr04+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G089240Zinc finger family protein (AHRD V1 ***- D7KZF4_ARALY)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech02-View
SL02G065720RING finger protein 13 (AHRD V1 *-*- RNF13_MOUSE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G012580Zinc finger family protein (AHRD V1 **-* D7M7G2_ARALY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr02+View
ST02G033640Zinc finger family protein (AHRD V1 **-* D7KZF4_ARALY); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G11080No description available.scaffold_4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G16070name=GSVIVG01036545001;chr14+View


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Gene id
Species
Description
Chromosome
Strand