Anchorpoints

Gene id
TP2G24380
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP6G34950similar to AT5G08000|E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)ch6-6-View
TP1G16620similar to AT1G18650|PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)ch1-1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G07700No description available.scaffold_6+View
AL8G27310No description available.scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G18650plasmodesmata callose-binding protein 3 (PDCB3); CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 1473 Blast hits to 1425 proteins in 72 species: Archae - 4; Bacteria - 6; Metazoa - 5; Fungi - 46; Plants - 1391; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). plasmodesmata callose-binding protein 3 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.1-View
AT5G61130plasmodesmata callose-binding protein 1 (PDCB1); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: callose deposition in cell wall; LOCATED IN: plasmodesma, anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 2214 Blast hits to 2014 proteins in 207 species: Archae - 0; Bacteria - 106; Metazoa - 136; Fungi - 241; Plants - 1436; Viruses - 12; Other Eukaryotes - 283 (source: NCBI BLink). Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose. plasmodesmata callose-binding protein 15-View
AT5G08000glucan endo-1,3-beta-glucosidase-like protein 3 'glucan endo-1,3-beta-glucosidase-like protein 3' (E13L3); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 1 (TAIR:AT5G61130.1); Has 1582 Blast hits to 1532 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 10; Fungi - 147; Plants - 1404; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G05500No description available.A09-View
BR10G25790No description available.A10+View
BR02G38040No description available.A02-View
BR03G40730No description available.A03-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G75840No description available.Bvchr5_un.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G24740No description available.Chr5-View
CL05G08000No description available.Chr5-View
CL04G11650No description available.Chr4-View
CL06G16270No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G01130No description available.CM3.5_scaffold00001+View
CM00030G01450No description available.CM3.5_scaffold00030+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00094G00400No description available.supercontig_94+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G06750No description available.scaffold_6+View
CRU_008G21220No description available.scaffold_8-View
CRU_001G17490No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00122G00480No description available.scaffold00122+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G25900No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G12210Glucan endo-1,3-beta-glucosidase-like protein 3, Precursor (similar to)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G00470No description available.Gm05-View
GM17G08570No description available.Gm17+View
GM06G21982No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G09360No description available.Chr13+View
GR08G19850No description available.Chr08+View
GR03G10100No description available.Chr03+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G029830No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G016460No description available.6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08359G01710No description available.scaffold08359-View
ME06656G01200No description available.scaffold06656-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G109490carbohydrate-binding X8 domain proteinchr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G40940X8 domain containing protein, expressed7+View
OS03G54910X8 domain containing protein, expressed3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G20760No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G15890No description available.Chr10-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G01500No description available.30138-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G115200Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE)%3B contains Interpro domain(s) IPR012946 X8ch03-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G028700Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE); contains Interpro domain(s) IPR012946 X8chr03-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G33100No description available.scaffold_2-View
TC0003G10430No description available.scaffold_3+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G02730name=GSVIVG01007873001;chr17+View
VV01G10380name=GSVIVG01012212001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G23530hydrolase, hydrolyzing O-glycosyl compounds7+View
ZM02G36670No description available.2+View


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Gene id
Species
Description
Chromosome
Strand