Anchorpoints

Gene id
TP1G29800
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP1G19790similar to AT1G22280|protein phosphatase 2C, putative / PP2C, putativech1-1+View
TP5G27830similar to AT1G72770|HAB1 (HOMOLOGY TO ABI1)ch5-6+View
TP1G15690similar to AT1G17550|HAB2ch1-1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G36060No description available.scaffold_1+View
AL2G21570No description available.scaffold_2+View
AL1G23830No description available.scaffold_1+View
AL1G18480No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G22280Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus. phytochrome-associated protein phosphatase type 2C (PAPP2C); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G34750.1). phytochrome-associated protein phosphatase type 2C1+View
AT1G72770HYPERSENSITIVE TO ABA1 homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1); Has 6788 Blast hits to 6778 proteins in 499 species: Archae - 4; Bacteria - 382; Metazoa - 1655; Fungi - 745; Plants - 2728; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.1+View
AT1G17550Protein Phosphatase 2C homology to ABI2 (HAB2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI1 (TAIR:AT1G72770.3); Has 6552 Blast hits to 6537 proteins in 424 species: Archae - 4; Bacteria - 229; Metazoa - 1602; Fungi - 744; Plants - 2705; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). homology to ABI21+View
AT1G34750Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). Protein phosphatase 2C family protein1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G19860No description available.A05-View
BR06G12520No description available.A06+View
BR09G25370No description available.A09-View
BR07G28840No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G08280No description available.Chr11+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00036G01370No description available.supercontig_36+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G31110No description available.scaffold_1+View
CRU_001G16530No description available.scaffold_1+View
CRU_001G20910No description available.scaffold_1+View
CRU_002G18520No description available.scaffold_2+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G02120No description available.scaffold00004+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G02820No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G39310Probable protein phosphatase 2C 10 (AtPP2C10) (putative)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G11000No description available.Gm04-View
GM06G10820No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G23650No description available.Chr09-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07027G00320No description available.scaffold07027+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G52180No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G16460No description available.Chr05-View
PT02G09720No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29908G01840No description available.29908+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G074190Protein phosphatase 2C-like (AHRD V1 ***- A2Q6E4_MEDTR)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2Cch04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G027950Serine/threonine phosphatase family protein (AHRD V1 **** C1E0J1_MICSR); contains Interpro domain(s) IPR015655 Protein phosphatase 2Cchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G10250No description available.scaffold_8-View


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Gene id
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Description
Chromosome
Strand