Anchorpoints
- Gene id
- TP1G29800
- Organism
- Thellungiella parvula
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G19790 | similar to AT1G22280|protein phosphatase 2C, putative / PP2C, putative | ch1-1 | + | View |
TP5G27830 | similar to AT1G72770|HAB1 (HOMOLOGY TO ABI1) | ch5-6 | + | View |
TP1G15690 | similar to AT1G17550|HAB2 | ch1-1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G36060 | No description available. | scaffold_1 | + | View |
AL2G21570 | No description available. | scaffold_2 | + | View |
AL1G23830 | No description available. | scaffold_1 | + | View |
AL1G18480 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G22280 | Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus. phytochrome-associated protein phosphatase type 2C (PAPP2C); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G34750.1). phytochrome-associated protein phosphatase type 2C | 1 | + | View |
AT1G72770 | HYPERSENSITIVE TO ABA1 homology to ABI1 (HAB1); FUNCTIONS IN: protein serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: homology to ABI2 (TAIR:AT1G17550.1); Has 6788 Blast hits to 6778 proteins in 499 species: Archae - 4; Bacteria - 382; Metazoa - 1655; Fungi - 745; Plants - 2728; Viruses - 7; Other Eukaryotes - 1267 (source: NCBI BLink). mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid. | 1 | + | View |
AT1G17550 | Protein Phosphatase 2C homology to ABI2 (HAB2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI1 (TAIR:AT1G72770.3); Has 6552 Blast hits to 6537 proteins in 424 species: Archae - 4; Bacteria - 229; Metazoa - 1602; Fungi - 744; Plants - 2705; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). homology to ABI2 | 1 | + | View |
AT1G34750 | Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: phytochrome-associated protein phosphatase type 2C (TAIR:AT1G22280.1); Has 7616 Blast hits to 7609 proteins in 922 species: Archae - 14; Bacteria - 1457; Metazoa - 1483; Fungi - 777; Plants - 2623; Viruses - 11; Other Eukaryotes - 1251 (source: NCBI BLink). Protein phosphatase 2C family protein | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G19860 | No description available. | A05 | - | View |
BR06G12520 | No description available. | A06 | + | View |
BR09G25370 | No description available. | A09 | - | View |
BR07G28840 | No description available. | A07 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL11G08280 | No description available. | Chr11 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00036G01370 | No description available. | supercontig_36 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G31110 | No description available. | scaffold_1 | + | View |
CRU_001G16530 | No description available. | scaffold_1 | + | View |
CRU_001G20910 | No description available. | scaffold_1 | + | View |
CRU_002G18520 | No description available. | scaffold_2 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00004G02120 | No description available. | scaffold00004 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G02820 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G39310 | Probable protein phosphatase 2C 10 (AtPP2C10) (putative) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G11000 | No description available. | Gm04 | - | View |
GM06G10820 | No description available. | Gm06 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G23650 | No description available. | Chr09 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07027G00320 | No description available. | scaffold07027 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G52180 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G16460 | No description available. | Chr05 | - | View |
PT02G09720 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29908G01840 | No description available. | 29908 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G074190 | Protein phosphatase 2C-like (AHRD V1 ***- A2Q6E4_MEDTR)%3B contains Interpro domain(s) IPR015655 Protein phosphatase 2C | ch04 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G027950 | Serine/threonine phosphatase family protein (AHRD V1 **** C1E0J1_MICSR); contains Interpro domain(s) IPR015655 Protein phosphatase 2C | chr04 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G10250 | No description available. | scaffold_8 | - | View |