Anchorpoints

Gene id
TP1G21130
Organism
Thellungiella parvula

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TP6G29300similar to AT5G14740|CA2 (CARBONIC ANHYDRASE 2)ch6-6-View
TP3G00570similar to AT3G01500|CA1 (CARBONIC ANHYDRASE 1)ch3-1+View
TP5G25490similar to AT1G70410|carbonic anhydrase, putative / carbonate dehydratase, putativech5-6-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G00630No description available.scaffold_3+View
AL2G18920No description available.scaffold_2-View
AL1G25540No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G23730beta carbonic anhydrase 3 beta carbonic anhydrase 3 (BCA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 4 (TAIR:AT1G70410.1); Has 5075 Blast hits to 5060 proteins in 1504 species: Archae - 26; Bacteria - 3914; Metazoa - 59; Fungi - 205; Plants - 361; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).1+View
AT1G70410beta carbonic anhydrase 4 (BCA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, carbon utilization, regulation of stomatal movement; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 3 (TAIR:AT1G23730.1); Has 4986 Blast hits to 4971 proteins in 1496 species: Archae - 34; Bacteria - 3845; Metazoa - 59; Fungi - 209; Plants - 361; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). beta carbonic anhydrase 4 Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells.1-View
AT3G01500Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells. carbonic anhydrase 1 carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5061 Blast hits to 5044 proteins in 1509 species: Archae - 36; Bacteria - 3893; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink).3-View
AT5G14740Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform. carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5122 Blast hits to 5105 proteins in 1527 species: Archae - 36; Bacteria - 3955; Metazoa - 59; Fungi - 207; Plants - 361; Viruses - 0; Other Eukaryotes - 504 (source: NCBI BLink). carbonic anhydrase 25+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00058G01870No description available.scaffold00058+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G20340No description available.A02-View
BR09G30820No description available.A09-View
BR07G08870No description available.A07-View
BR07G26950No description available.A07-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09830No description available.Bvchr6.sca027+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G12330No description available.Chr10+View
CL05G26240No description available.Chr5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G03140No description available.CM3.5_scaffold00016+View
CM00011G09070No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00069G00430No description available.supercontig_69-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G12620No description available.scaffold_6+View
CRU_003G00560No description available.scaffold_3+View
CRU_002G16150No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00020G01480No description available.scaffold00020+View
CS00028G00180No description available.scaffold00028+View
CS00003G02560No description available.scaffold00003+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G27450No description available.scaffold_2+View
EG0009G15010No description available.scaffold_9+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV4G21670Carbonic anhydrase, chloroplastic, Precursor (similar to)LG4+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G19080No description available.Gm18-View
GM19G01050No description available.Gm19+View
GM08G39510No description available.Gm08+View
GM06G19400No description available.Gm06+View
GM02G03990No description available.Gm02-View
GM05G08590No description available.Gm05-View
GM01G03720No description available.Gm01+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G26240No description available.Chr01-View
GR06G03030No description available.Chr06-View
GR08G29500No description available.Chr08-View
GR09G33800No description available.Chr09+View
GR05G18230No description available.Chr05+View
GR12G06190No description available.Chr12-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G024360No description available.chr2-View
LJ2G015260No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G006580No description available.13-View
MD16G005180No description available.16-View
MD17G002540No description available.17+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03823G00030No description available.scaffold03823-View
ME04083G00090No description available.scaffold04083+View
ME05378G00040No description available.scaffold05378+View
ME05335G00760No description available.scaffold05335+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G077910carbonic anhydrase family proteinchr3+View
MT8G064630carbonic anhydrase family proteinchr8-View
MT5G034250carbonic anhydrase family proteinchr5+View
MT6G006990carbonic anhydrase family proteinchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G26420No description available.scaffold_1+View
PPE_003G26310No description available.scaffold_3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G34890No description available.Chr01-View
PT15G07590No description available.Chr15-View
PT10G04110No description available.Chr10-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29933G00040No description available.29933-View
RC29631G00360No description available.29631+View
RC30147G06240No description available.30147+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G005490Carbonic anhydrase (AHRD V1 ***- Q5NE21_SOLLC)%3B contains Interpro domain(s) IPR015892 Carbonic anhydrase%2C prokaryotic-like%2C conserved sitech05-View
SL02G086820Carbonic anhydrase (AHRD V1 ***- Q5NE20_SOLLC)%3B contains Interpro domain(s) IPR015892 Carbonic anhydrase%2C prokaryotic-like%2C conserved sitech02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G013790Carbonic anhydrase (AHRD V1 ***- B1VK36_SOLLC); contains Interpro domain(s) IPR001765 Carbonic anhydrasechr02-View
ST02G036100Carbonic anhydrase (AHRD V1 ***- Q5NE20_SOLLC); contains Interpro domain(s) IPR001765 Carbonic anhydrasechr02-View
ST05G013130Carbonic anhydrase (AHRD V1 ***- Q5NE21_SOLLC); contains Interpro domain(s) IPR001765 Carbonic anhydrasechr05-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G01080No description available.scaffold_3-View
TC0004G01020No description available.scaffold_4-View
TC0002G25070No description available.scaffold_2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G01720name=GSVIVG01007745001;chr17+View
VV01G11160name=GSVIVG01013736001;chr1+View
VV14G11570name=GSVIVG01032466001;chr14+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G36610No description available.3-View
ZM08G24530No description available.8+View


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Gene id
Species
Description
Chromosome
Strand