Anchorpoints
- Gene id
- TC0009G35630
- Organism
- Theobroma cacao
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G15760 | No description available. | scaffold_4 | - | View |
TC0010G17910 | No description available. | scaffold_10r | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G00160 | No description available. | scaffold_6 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G01880 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). RING/U-box superfamily protein | 5 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00077G00480 | No description available. | scaffold00077 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G11870 | No description available. | Bvchr2.sca018 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00076G00190 | No description available. | CM3.5_scaffold00076 | + | View |
CM00040G02400 | No description available. | CM3.5_scaffold00040 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00019G00640 | No description available. | supercontig_19 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00547G00020 | No description available. | scaffold00547 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G01030 | No description available. | scaffold_10 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G08720 | RING-H2 finger protein ATL5A (similar to) | LG6 | - | View |
FV7G31100 | RING-H2 finger protein ATL3C (similar to) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G36040 | No description available. | Gm11 | - | View |
GM04G40020 | No description available. | Gm04 | + | View |
GM18G44640 | No description available. | Gm18 | - | View |
GM18G02390 | No description available. | Gm18 | + | View |
GM09G41180 | No description available. | Gm09 | - | View |
GM06G14830 | No description available. | Gm06 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G12770 | No description available. | Chr11 | - | View |
GR13G27180 | No description available. | Chr13 | - | View |
GR05G00460 | No description available. | Chr05 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD04G002850 | No description available. | 4 | + | View |
MD12G019540 | No description available. | 12 | + | View |
MD03G004860 | No description available. | 3 | + | View |
MD04G014050 | No description available. | 4 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME09360G00360 | No description available. | scaffold09360 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G094000 | RING-H2 zinc finger protein | chr3 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS11G02250 | zinc finger, C3HC4 type domain containing protein, expressed | 11 | - | View |
OS12G02210 | RING finger protein, putative, expressed | 12 | - | View |
OS01G60730 | RING-H2 finger protein, putative, expressed | 1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G25300 | No description available. | scaffold_2 | + | View |
PPE_006G29940 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT13G15700 | No description available. | Chr13 | + | View |
PT16G13620 | No description available. | Chr16 | + | View |
PT19G13010 | No description available. | Chr19 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29729G00970 | No description available. | 29729 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G051250 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch06 | + | View |
SL06G049030 | Ring finger protein (AHRD V1 ***- O49869_HORVU)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G09320 | name=GSVIVG01032684001; | chr13 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM03G28320 | No description available. | 3 | + | View |
ZM06G26690 | RING-H2 finger protein ATL5A | 6 | - | View |