Anchorpoints

Gene id
TC0009G20360
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G20060No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G19770tubulin alpha-3 (TUA3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cellular response to gravity; LOCATED IN: tubulin complex, cytosol, cell wall, plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-5 (TAIR:AT5G19780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tubulin alpha-3 tubulin 35-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00068G00440No description available.scaffold00068-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV4G11350No description available.Bvchr4.sca001+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00119G00500No description available.supercontig_119+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00123G00130No description available.scaffold00123-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G30080No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G37350Tubulin alpha-6 chain (similar to)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G12140No description available.Gm08-View
GM05G29000No description available.Gm05+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G041450No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G000330No description available.11+View
MD03G000850No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06582G01240No description available.scaffold06582+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G085980tubulin beta-1 chainchr8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G22030No description available.Chr03-View
PT01G00460No description available.Chr01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G07590name=GSVIVG01025462001;chr6+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G25130Tubulin alpha-6 chain Tubulin alpha-5 chain alpha tubulin6;Tubulin alpha-6 chain (Alpha-6-tubulin)7+View


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Gene id
Species
Description
Chromosome
Strand