Anchorpoints

Gene id
TC0008G18570
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G20770No description available.scaffold_2+View
AL1G37360No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G72010TCP family transcription factor TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G35560.1); Has 492 Blast hits to 490 proteins in 74 species: Archae - 0; Bacteria - 8; Metazoa - 7; Fungi - 7; Plants - 465; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).1+View
AT1G35560TCP family transcription factor Encodes a member of the TCP-P subfamily that is involved in flowering time control and plant development. Mutants present an early flowering phenotype. TCP family transcription factor ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G72010.1); Has 382 Blast hits to 382 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 349; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G21230No description available.A02+View
BR07G28280No description available.A07+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00066G00240No description available.supercontig_66-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G17730No description available.scaffold_2+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G21270No description available.scaffold_6-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G28900No description available.Chr09-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09565G00270No description available.scaffold09565-View
ME07313G00030No description available.scaffold07313+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G11070No description available.Chr13-View
PT19G08180No description available.Chr19-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29728G00060No description available.29728+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G065190TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCPch06-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G024220TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr06-View
ST11G015360TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCPchr11+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G27080similar to AT1G72010|TCP family transcription factor, putativech5-6+View


Download

Gene id
Species
Description
Chromosome
Strand