Anchorpoints
- Gene id
- TC0005G31320
- Organism
- Theobroma cacao
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G29010 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G27530 | No description available. | scaffold_7 | + | View |
AL6G39080 | No description available. | scaffold_6 | - | View |
AL3G05540 | No description available. | scaffold_3 | - | View |
AL6G27360 | No description available. | scaffold_6 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G02300 | Plant invertase/pectin methylesterase inhibitor superfamily Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower, cultured cell; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G02320.1); Has 2686 Blast hits to 2624 proteins in 317 species: Archae - 6; Bacteria - 574; Metazoa - 1; Fungi - 202; Plants - 1878; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | 4 | - | View |
AT3G05610 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G27870.1); Has 12764 Blast hits to 3759 proteins in 499 species: Archae - 10; Bacteria - 1644; Metazoa - 570; Fungi - 815; Plants - 2126; Viruses - 67; Other Eukaryotes - 7532 (source: NCBI BLink). Plant invertase/pectin methylesterase inhibitor superfamily | 3 | - | View |
AT5G27870 | Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT3G05610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Plant invertase/pectin methylesterase inhibitor superfamily | 5 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G30030 | No description available. | A03 | - | View |
BR09G03850 | No description available. | A09 | + | View |
BR05G34730 | No description available. | A05 | + | View |
BR00G07460 | No description available. | Scaffold000215 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV4G09670 | No description available. | Bvchr4.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G07030 | No description available. | Chr5 | - | View |
CL09G05130 | No description available. | Chr9 | - | View |
CL06G04750 | No description available. | Chr6 | + | View |
CL03G16830 | No description available. | Chr3 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00025G00680 | No description available. | CM3.5_scaffold00025 | + | View |
CM00047G01840 | No description available. | CM3.5_scaffold00047 | + | View |
CM00006G07890 | No description available. | CM3.5_scaffold00006 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00048G01080 | No description available. | supercontig_48 | - | View |
CP00151G00190 | No description available. | supercontig_151 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G01730 | No description available. | scaffold_1 | + | View |
CRU_003G04730 | No description available. | scaffold_3 | - | View |
CRU_006G33640 | No description available. | scaffold_6 | - | View |
CRU_007G24500 | No description available. | scaffold_7 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00004G05400 | No description available. | scaffold00004 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G02370 | Pectinesterase 22 (PE 22), Precursor (similar to) | LG6 | + | View |
FV2G28310 | Pectinesterase 41 (PE 41), Precursor (putative) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM20G38160 | No description available. | Gm20 | - | View |
GM09G04720 | No description available. | Gm09 | + | View |
GM15G16141 | No description available. | Gm15 | - | View |
GM07G02750 | No description available. | Gm07 | + | View |
GM10G29150 | No description available. | Gm10 | + | View |
GM03G37391 | No description available. | Gm03 | - | View |
GM19G39990 | No description available. | Gm19 | - | View |
GM19G41950 | No description available. | Gm19 | + | View |
GM03G39360 | No description available. | Gm03 | + | View |
GM07G37460 | No description available. | Gm07 | + | View |
GM17G03170 | No description available. | Gm17 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR13G12680 | No description available. | Chr13 | - | View |
GR08G14370 | No description available. | Chr08 | - | View |
GR07G12700 | No description available. | Chr07 | - | View |
GR04G09140 | No description available. | Chr04 | + | View |
GR07G34080 | No description available. | Chr07 | + | View |
GR04G23870 | No description available. | Chr04 | + | View |
GR07G30200 | No description available. | Chr07 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G071790 | No description available. | chr1 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G024710 | No description available. | 3 | - | View |
MD04G016200 | No description available. | 4 | + | View |
MD13G014990 | No description available. | 13 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME04457G00510 | No description available. | scaffold04457 | - | View |
ME02264G01510 | No description available. | scaffold02264 | + | View |
ME01945G00630 | No description available. | scaffold01945 | + | View |
ME10305G00010 | No description available. | scaffold10305 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G083470 | pectinesterase/pectinesterase inhibitor | chr1 | + | View |
MT7G112580 | pectinesterase/pectinesterase inhibitor | chr7 | + | View |
MT4G120280 | pectinesterase/pectinesterase inhibitor | chr4 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G20980 | pectinesterase, putative, expressed | 1 | - | View |
OS07G47830 | pectinesterase, putative, expressed | 7 | - | View |
OS05G29790 | pectinesterase, putative, expressed | 5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G32370 | No description available. | scaffold_6 | + | View |
PPE_008G27590 | No description available. | scaffold_8 | - | View |
PPE_001G12390 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G02270 | No description available. | Chr05 | + | View |
PT14G12700 | No description available. | Chr14 | + | View |
PT13G01320 | No description available. | Chr13 | + | View |
PT02G20250 | No description available. | Chr02 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29986G00590 | No description available. | 29986 | - | View |
RC29726G01920 | No description available. | 29726 | - | View |
RC30128G02470 | No description available. | 30128 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G075330 | Pectinesterase (AHRD V1 ***- B9I9P7_POPTR)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch09 | - | View |
SL01G099940 | Pectinesterase (AHRD V1 ***- B9RFE0_RICCO)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch01 | - | View |
SL01G066360 | Pectinesterase (AHRD V1 ***- Q4G2Z0_TOBAC)%3B contains Interpro domain(s) IPR000070 Pectinesterase%2C catalytic | ch01 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G037730 | Pectinesterase (AHRD V1 ***- B9RFE0_RICCO); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr01 | - | View |
ST09G022890 | Pectinesterase (AHRD V1 ***- B9I9P7_POPTR); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic | chr09 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G04490 | similar to AT3G05610|pectinesterase family protein | ch3-1 | - | View |
TP6G02190 | similar to AT4G02300|pectinesterase family protein | ch6-1 | - | View |
TP7G14480 | similar to AT4G15980|pectinesterase family protein | ch7-4 | - | View |
TP1G01780 | similar to AT1G02810|pectinesterase family protein | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV14G09010 | name=GSVIVG01031165001; | chr14 | - | View |
VV07G08590 | name=GSVIVG01028040001; | chr7 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G29980 | No description available. | 7 | - | View |