Anchorpoints

Gene id
TC0001G37210
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G31530No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G60820PBF1; FUNCTIONS IN: peptidase activity, endopeptidase activity, threonine-type endopeptidase activity; INVOLVED IN: defense response to fungus, incompatible interaction, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, proteasome complex, plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome, beta-type subunit, conserved site (InterPro:IPR016050), Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST Arabidopsis thaliana protein match is: proteasome beta subunit C1 (TAIR:AT1G21720.1); Has 4354 Blast hits to 4354 proteins in 444 species: Archae - 499; Bacteria - 50; Metazoa - 1642; Fungi - 1076; Plants - 489; Viruses - 0; Other Eukaryotes - 598 (source: NCBI BLink). N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes 20S proteasome beta subunit PBF1 (PBF1).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G01230No description available.A04+View
BR07G16690No description available.A07-View
BR09G40310No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G65660No description available.Bvchr1_un.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G02520No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G02710No description available.CM3.5_scaffold00006+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G26170No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G01790No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G11740No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G11100Proteasome subunit beta type-1 (similar to)LG7+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR04G04090No description available.Chr04+View
GR01G17360No description available.Chr01+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G038370No description available.chr3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04882G00690No description available.scaffold04882+View
ME02441G00060No description available.scaffold02441-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G14360No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G14830No description available.Chr02-View
PT14G06980No description available.Chr14-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G01470No description available.30174-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G02430similar to AT3G60820|PBF1ch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G08870name=GSVIVG01027613001;chr15+View


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Gene id
Species
Description
Chromosome
Strand