Anchorpoints

Gene id
TC0001G35170
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TC0008G03140No description available.scaffold_8+View
TC0001G02660No description available.scaffold_1-View
TC0003G28090No description available.scaffold_3-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G40230No description available.scaffold_6-View
AL4G34060No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G01370Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis. MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). MAP kinase 44+View
AT1G01560member of MAP Kinase MAP kinase 11 (MPK11); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: signal transduction, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). MAP kinase 111+View
AT2G46070Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants. mitogen-activated protein kinase 12 mitogen-activated protein kinase 12 (MPK12); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 125734 Blast hits to 124415 proteins in 4732 species: Archae - 106; Bacteria - 13752; Metazoa - 47505; Fungi - 12616; Plants - 30542; Viruses - 578; Other Eukaryotes - 20635 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G28020No description available.A03+View
BR05G05490No description available.A05-View
BR09G01680No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06170No description available.Bvchr1.sca001+View
BV5G07010No description available.Bvchr5.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G02230No description available.Chr1+View
CL06G02300No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00047G00510No description available.CM3.5_scaffold00047+View
CM00005G06790No description available.CM3.5_scaffold00005-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00184G00160No description available.supercontig_184-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G35190No description available.scaffold_6+View
CRU_001G00620No description available.scaffold_1-View
CRU_004G27730No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01370No description available.scaffold00009-View
CS00001G03470No description available.scaffold00001-View
CS00002G04640No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G00970No description available.scaffold_5+View
EG0005G05680No description available.scaffold_5-View
EG0006G12930No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G03460Mitogen-activated protein kinase 2 (MAP kinase 2) (putative)LG5-View
FV7G07260Mitogen-activated protein kinase homolog MMK2 (putative)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G03210No description available.Gm04-View
GM06G03270No description available.Gm06-View
GM11G02420No description available.Gm11+View
GM08G02060No description available.Gm08-View
GM16G03670No description available.Gm16+View
GM09G39190No description available.Gm09+View
GM07G07270No description available.Gm07+View
GM01G43100No description available.Gm01-View
GM05G37480No description available.Gm05+View
GM18G47140No description available.Gm18-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G24980No description available.Chr08-View
GR09G19940No description available.Chr09-View
GR03G15570No description available.Chr03+View
GR01G15880No description available.Chr01+View
GR08G12010No description available.Chr08+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G034640No description available.chr1+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G015510No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02658G00980No description available.scaffold02658+View
ME05280G00640No description available.scaffold05280-View
ME03581G01480No description available.scaffold03581+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G112210MAP kinase-like Ntf4 proteinchr3+View
MT8G098845MAP kinasechr8-View
MT7G078690MAP kinasechr7-View
MT8G028720MAP kinasechr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS10G38950Mitogen-activated protein kinase 6 CGMC_MAPKCMGC_2_ERK.14 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed10+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G11400No description available.scaffold_5-View
PPE_002G17060No description available.scaffold_2-View
PPE_001G38270No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G13180No description available.Chr03-View
PT14G08850No description available.Chr14-View
PT01G09990No description available.Chr01+View
PT02G16250No description available.Chr02-View
PT05G23110No description available.Chr05+View
PT02G03210No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G04420No description available.30170+View
RC30190G04330No description available.30190-View
RC30174G03270No description available.30174-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094960Mitogen-activated protein kinase 4 (AHRD V1 **** D7R517_SOLLC)%3B contains Interpro domain(s) IPR008351 JNK MAP kinasech01+View
SL04G080730Mitogen-activated protein kinase 9 (AHRD V1 **** D9J1Y9_SOLLC)%3B contains Interpro domain(s) IPR002290 Serine/threonine protein kinasech04+View
SL08G081490Mitogen-activated protein kinase (AHRD V1 **** Q8LT16_SOLTU)%3B contains Interpro domain(s) IPR008351 JNK MAP kinasech08-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G032370Mitogen-activated protein kinase 4 (AHRD V1 **** D7R517_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr01+View
ST04G034130Mitogen-activated protein kinase 9 (AHRD V1 **** D9J1Y9_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr04+View
ST08G028940Mitogen-activated protein kinase (AHRD V1 **** Q8LT16_SOLTU); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr08+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G00760similar to AT4G01370|ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)ch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G05440name=GSVIVG01026984001;chr15-View
VV02G03570name=GSVIVG01019406001;chr2-View
VV18G09420name=GSVIVG01009766001;chr18+View


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Gene id
Species
Description
Chromosome
Strand