Anchorpoints

Gene id
TC0001G00150
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TC0008G09510No description available.scaffold_8+View
TC0002G14280No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G22110No description available.scaffold_1-View
AL3G38130No description available.scaffold_3+View
AL2G25460No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G76510ARID/BRIGHT DNA-binding domain-containing protein ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G20910.1).1-View
AT1G20910ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2); Has 727 Blast hits to 727 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 457; Fungi - 67; Plants - 164; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). ARID/BRIGHT DNA-binding domain-containing protein1-View
AT2G17410ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2); Has 5354 Blast hits to 4027 proteins in 528 species: Archae - 33; Bacteria - 832; Metazoa - 1934; Fungi - 748; Plants - 402; Viruses - 44; Other Eukaryotes - 1361 (source: NCBI BLink). ARID/BRIGHT DNA-binding domain-containing protein2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00022G01190No description available.scaffold00022+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G15110No description available.A06-View
BR08G24910No description available.A08+View
BR07G10140No description available.A07+View
BR10G17230No description available.A10-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G02080No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G00110No description available.CM3.5_scaffold00021+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G30270No description available.scaffold_3+View
CRU_001G19540No description available.scaffold_1-View
CRU_002G22110No description available.scaffold_2-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G07210No description available.scaffold00002-View
CS00023G02200No description available.scaffold00023-View
CS00017G02560No description available.scaffold00017+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G18490No description available.scaffold_9+View
EG0006G14840No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G11520Probable RNA-dependent RNA polymerase 4 (OsRDR4)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM16G21840No description available.Gm16-View
GM04G01560No description available.Gm04+View
GM11G09370No description available.Gm11-View
GM01G36040No description available.Gm01+View
GM09G32820No description available.Gm09+View
GM06G01640No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G00080No description available.Chr03+View
GR02G11240No description available.Chr02+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G010360No description available.10-View
MD02G008970No description available.2+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G02260No description available.scaffold06512-View
ME07520G03710No description available.scaffold07520-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G024920AT-rich interactive domain proteinchr5-View
MT3G116200ARID/bright DNA-binding domain proteinchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G19960No description available.scaffold_8-View
PPE_007G20830No description available.scaffold_7-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G00370No description available.Chr02+View
PT05G25730No description available.Chr05-View
PT01G45650No description available.Chr01+View
PT11G14540No description available.Chr11-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29682G00090No description available.29682-View
RC30170G07430No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G082820ARID/BRIGHT DNA-binding domain-containing protein (AHRD V1 *-*- D7KTU4_ARALY)%3B contains Interpro domain(s) IPR001606 AT-rich interaction regionch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G036330ARID/BRIGHT DNA-binding domain-containing protein (AHRD V1 ***- D7KTU4_ARALY); contains Interpro domain(s) IPR008978 HSP20-like chaperonechr04-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G30730similar to AT2G17410|ARID/BRIGHT DNA-binding domain-containing proteinch3-6+View
TP1G18610similar to AT1G20910|ARID/BRIGHT DNA-binding domain-containing proteinch1-1-View
TP5G31670similar to AT1G76510|ARID/BRIGHT DNA-binding domain-containing proteinch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G04640name=GSVIVG01026435001;chr4-View


Download

Gene id
Species
Description
Chromosome
Strand