Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- TC0001G00120
- Organism
- Theobroma cacao
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0008G09500 | No description available. | scaffold_8 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G22130 | No description available. | scaffold_1 | + | View |
| AL3G38250 | No description available. | scaffold_3 | + | View |
| AL2G25470 | No description available. | scaffold_2 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G20925 | Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 641 Blast hits to 607 proteins in 137 species: Archae - 6; Bacteria - 69; Metazoa - 0; Fungi - 180; Plants - 327; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). Auxin efflux carrier family protein | 1 | + | View |
| AT1G76520 | Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76530.1); Has 676 Blast hits to 645 proteins in 140 species: Archae - 2; Bacteria - 51; Metazoa - 0; Fungi - 244; Plants - 324; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). Auxin efflux carrier family protein | 1 | + | View |
Amborella trichopoda
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATR_00022G01150 | No description available. | scaffold00022 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR06G15130 | No description available. | A06 | + | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV6G06140 | No description available. | Bvchr6.sca005 | - | View |
Capsella rubella
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_001G19560 | No description available. | scaffold_1 | + | View |
| CRU_002G22120 | No description available. | scaffold_2 | + | View |
Citrus sinensis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CS00002G07220 | No description available. | scaffold00002 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0009G18470 | No description available. | scaffold_9 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV5G28230 | No description available. | LG5 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM16G21852 | No description available. | Gm16 | + | View |
| GM01G36030 | No description available. | Gm01 | - | View |
| GM09G32810 | No description available. | Gm09 | - | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR03G00090 | No description available. | Chr03 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD17G021980 | No description available. | 17 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02943G01360 | No description available. | scaffold02943 | + | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT5G024520 | auxin efflux carrier family protein | chr5 | + | View |
| MT8G072560 | auxin efflux carrier family protein | chr8 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT11G14560 | No description available. | Chr11 | + | View |
| PT02G00350 | No description available. | Chr02 | - | View |
| PT01G45620 | No description available. | Chr01 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G082450 | Auxin efflux carrier family protein (AHRD V1 **** D7L9F0_ARALY)%3B contains Interpro domain(s) IPR004776 Auxin efflux carrier | ch02 | + | View |
| SL04G082830 | Auxin efflux carrier family protein (AHRD V1 **** D7KJ74_ARALY)%3B contains Interpro domain(s) IPR004776 Auxin efflux carrier | ch04 | + | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST04G036360 | Auxin efflux carrier-like protein (Fragment) (AHRD V1 *-** E0ZER6_PICSI); contains Interpro domain(s) IPR004776 Auxin efflux carrier | chr04 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP1G18630 | similar to AT1G20925|auxin efflux carrier family protein | ch1-1 | + | View |
| TP5G31680 | similar to AT1G76520|auxin efflux carrier family protein | ch5-7 | + | View |