Anchorpoints

Gene id
ST12G031220
Organism
Solanum tuberosum

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G06870No description available.scaffold_3-View
AL8G13140No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G06650ATP-citrate lyase B-1 One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase ATP-citrate lyase B-1 (ACLB-1); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: citrate lyase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), CoA-binding (InterPro:IPR003781), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP citrate lyase subunit B 2 (TAIR:AT5G49460.1); Has 8069 Blast hits to 8065 proteins in 2074 species: Archae - 271; Bacteria - 4029; Metazoa - 557; Fungi - 289; Plants - 162; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink).3-View
AT5G49460ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G35440No description available.A02-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G04190No description available.Bvchr3.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G04310No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00047G01410No description available.CM3.5_scaffold00047-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G00530No description available.supercontig_9-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G05870No description available.scaffold_3-View
CRU_008G09150No description available.scaffold_8+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00016G01380No description available.scaffold00016+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G32670No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G39330Probable ATP-citrate synthase (similar to)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G03700No description available.Gm17+View
GM07G36840No description available.Gm07-View
GM15G15010No description available.Gm15-View
GM09G04000No description available.Gm09-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G03010No description available.Chr02+View
GR11G20010No description available.Chr11+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G023830No description available.chr6-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G014000No description available.13-View
MD16G009650No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00708G00470No description available.scaffold00708-View
ME01551G04400No description available.scaffold01551+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G034065ATP citrate lyase subunit B 2 C putativechr2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G065104Fe-4S binding domain containing protein, expressed5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G11070No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G14570No description available.Chr10+View
PT08G10530No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29889G00640No description available.29889+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G059880ATP citrate lyase a-subunit (AHRD V1 **** Q93YH4_LUPAL)%3B contains Interpro domain(s) IPR016141 Citrate synthase-like%2C corech01-View
SL12G099260ATP citrate lyase a-subunit (AHRD V1 **** Q93YH4_LUPAL)%3B contains Interpro domain(s) IPR016141 Citrate synthase-like%2C corech12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G30100No description available.scaffold_4+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G19780similar to AT5G49460|ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)ch2-4+View
TP3G05560similar to AT3G06650|ACLB-1ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G11550name=GSVIVG01034990001;chr5-View


Download

Gene id
Species
Description
Chromosome
Strand