Anchorpoints
- Gene id
- ST08G024490
- Organism
- Solanum tuberosum
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G33000 | No description available. | scaffold_4 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G45140 | plant VAP homolog 12 plant VAP homolog 12 (PVA12); FUNCTIONS IN: structural molecule activity; LOCATED IN: cytosol, endoplasmic reticulum, nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535), Vesicle-associated membrane protein (InterPro:IPR016763); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 1106 Blast hits to 1079 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 441; Fungi - 140; Plants - 434; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. | 2 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G08430 | No description available. | Bvchr5_un.sca001 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G03850 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00005G05020 | No description available. | CM3.5_scaffold00005 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00029G01460 | No description available. | supercontig_29 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G26780 | No description available. | scaffold_4 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00053G00630 | No description available. | scaffold00053 | + | View |
CS00001G01320 | No description available. | scaffold00001 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G03890 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G15100 | Vesicle-associated membrane protein-associated protein C16G5.05c (VAMP-associated protein C16G5.05c) (probable) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G15010 | No description available. | Gm17 | - | View |
GM11G03480 | No description available. | Gm11 | - | View |
GM01G41901 | No description available. | Gm01 | + | View |
GM05G04580 | No description available. | Gm05 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR03G17080 | No description available. | Chr03 | - | View |
GR07G08900 | No description available. | Chr07 | + | View |
GR06G21350 | No description available. | Chr06 | - | View |
GR08G23570 | No description available. | Chr08 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ2G034660 | No description available. | chr2 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11341G00040 | No description available. | scaffold11341 | - | View |
ME11581G00390 | No description available. | scaffold11581 | - | View |
ME08265G04940 | No description available. | scaffold08265 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G101020 | VAMP-associated protein | chr4 | + | View |
MT5G012420 | VAMP-associated protein | chr5 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G44300 | MSP domain containing protein, expressed | 2 | + | View |
OS04G46780 | MSP domain containing protein, expressed | 4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G07820 | No description available. | scaffold_5 | + | View |
PPE_002G13570 | No description available. | scaffold_2 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G07610 | No description available. | Chr03 | - | View |
PT03G08250 | No description available. | Chr03 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G00800 | No description available. | 30174 | + | View |
RC29916G00160 | No description available. | 29916 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G078690 | Vesicle-associated membrane protein-associated protein (AHRD V1 **-- Q1ANA7_WHEAT)%3B contains Interpro domain(s) IPR016763 Vesicle-associated membrane protein | ch08 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G24960 | No description available. | scaffold_3 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G00450 | name=GSVIVG01001317001; | chr2 | - | View |