Anchorpoints

Gene id
ST01G030140
Organism
Solanum tuberosum

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
ST08G024960CRABS CLAW (Fragment) (AHRD V1 **-- Q5EMM7_GOSHI); contains Interpro domain(s) IPR006780 YABBY proteinchr08-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G33070No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G00180YABBY3 (YAB3); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT2G45190.1); Has 469 Blast hits to 469 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 442; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). Plant-specific transcription factor YABBY family protein YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades.4-View
AT2G45190ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). Plant-specific transcription factor YABBY family protein Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G22260No description available.A03-View
BR04G26920No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G65150No description available.Bvchr1_un.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G02990No description available.Chr10-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G02890No description available.CM3.5_scaffold00021-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00145G00030No description available.supercontig_145-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G26830No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G01450No description available.scaffold00001-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G12170No description available.scaffold_5-View
EG0004G20540No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G00410Axial regulator YABBY 1 (putative)LG5-View
FV7G11780Axial regulator YABBY 1 (putative)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G04260No description available.Gm05+View
GM01G33370No description available.Gm01-View
GM03G03500No description available.Gm03+View
GM17G14710No description available.Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G08970No description available.Chr07-View
GR08G23650No description available.Chr08+View
GR01G17480No description available.Chr01+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07035G01090No description available.scaffold07035+View
ME08265G05040No description available.scaffold08265-View
ME04450G00080No description available.scaffold04450+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G025900plant-specific transcription factor YABBY family proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G13800No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G12020No description available.Chr01+View
PT14G06670No description available.Chr14-View
PT02G14510No description available.Chr02-View
PT03G11280No description available.Chr03-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G00950No description available.30174-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G079100CRABS CLAW (Fragment) (AHRD V1 **-- Q5EMM8_GOSHI)%3B contains Interpro domain(s) IPR006780 YABBY proteinch08-View
SL01G091010YABBY-like transcription factor CRABS CLAW-like protein (AHRD V1 **-* Q6SRZ7_ANTMA)%3B contains Interpro domain(s) IPR006780 YABBY proteinch01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G37600No description available.scaffold_1+View
TC0003G25410No description available.scaffold_3-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G27240similar to AT2G45190|AFO (ABNORMAL FLORAL ORGANS)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G00060name=GSVIVG01001269001;chr2+View
VV15G09160name=GSVIVG01027648001;chr15+View


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Gene id
Species
Description
Chromosome
Strand