Anchorpoints
- Gene id
- ST01G030140
- Organism
- Solanum tuberosum
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST08G024960 | CRABS CLAW (Fragment) (AHRD V1 **-- Q5EMM7_GOSHI); contains Interpro domain(s) IPR006780 YABBY protein | chr08 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G33070 | No description available. | scaffold_4 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G00180 | YABBY3 (YAB3); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT2G45190.1); Has 469 Blast hits to 469 proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 442; Viruses - 2; Other Eukaryotes - 15 (source: NCBI BLink). Plant-specific transcription factor YABBY family protein YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades. | 4 | - | View |
AT2G45190 | ABNORMAL FLORAL ORGANS (AFO); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: Plant-specific transcription factor YABBY family protein (TAIR:AT4G00180.1); Has 454 Blast hits to 452 proteins in 126 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 436; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). Plant-specific transcription factor YABBY family protein Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G22260 | No description available. | A03 | - | View |
BR04G26920 | No description available. | A04 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G65150 | No description available. | Bvchr1_un.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G02990 | No description available. | Chr10 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00021G02890 | No description available. | CM3.5_scaffold00021 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00145G00030 | No description available. | supercontig_145 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G26830 | No description available. | scaffold_4 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00001G01450 | No description available. | scaffold00001 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0005G12170 | No description available. | scaffold_5 | - | View |
EG0004G20540 | No description available. | scaffold_4 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G00410 | Axial regulator YABBY 1 (putative) | LG5 | - | View |
FV7G11780 | Axial regulator YABBY 1 (putative) | LG7 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G04260 | No description available. | Gm05 | + | View |
GM01G33370 | No description available. | Gm01 | - | View |
GM03G03500 | No description available. | Gm03 | + | View |
GM17G14710 | No description available. | Gm17 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G08970 | No description available. | Chr07 | - | View |
GR08G23650 | No description available. | Chr08 | + | View |
GR01G17480 | No description available. | Chr01 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07035G01090 | No description available. | scaffold07035 | + | View |
ME08265G05040 | No description available. | scaffold08265 | - | View |
ME04450G00080 | No description available. | scaffold04450 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G025900 | plant-specific transcription factor YABBY family protein | chr4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G13800 | No description available. | scaffold_2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G12020 | No description available. | Chr01 | + | View |
PT14G06670 | No description available. | Chr14 | - | View |
PT02G14510 | No description available. | Chr02 | - | View |
PT03G11280 | No description available. | Chr03 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30174G00950 | No description available. | 30174 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G079100 | CRABS CLAW (Fragment) (AHRD V1 **-- Q5EMM8_GOSHI)%3B contains Interpro domain(s) IPR006780 YABBY protein | ch08 | - | View |
SL01G091010 | YABBY-like transcription factor CRABS CLAW-like protein (AHRD V1 **-* Q6SRZ7_ANTMA)%3B contains Interpro domain(s) IPR006780 YABBY protein | ch01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G37600 | No description available. | scaffold_1 | + | View |
TC0003G25410 | No description available. | scaffold_3 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G27240 | similar to AT2G45190|AFO (ABNORMAL FLORAL ORGANS) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV02G00060 | name=GSVIVG01001269001; | chr2 | + | View |
VV15G09160 | name=GSVIVG01027648001; | chr15 | + | View |