Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G06360No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G06300Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline)and other proline rich peptides, including those with sequences corresponding to those in arabinogalactan proteins and extensins. P4H isoform 2 (AT-P4H-2); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G18900.1); Has 2500 Blast hits to 2478 proteins in 341 species: Archae - 0; Bacteria - 386; Metazoa - 1038; Fungi - 78; Plants - 408; Viruses - 17; Other Eukaryotes - 573 (source: NCBI BLink). P4H isoform 23+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G15890No description available.A10+View
BR02G09230No description available.A02-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G05400No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G06960No description available.CM3.5_scaffold00006+View
CM00047G02570No description available.CM3.5_scaffold00047-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G05490No description available.scaffold_3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G02430No description available.Gm17+View
GM07G38330No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G18280No description available.Chr11+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G013100No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME01551G02940No description available.scaffold01551+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G118560prolyl 4-hydroxylase subunit alpha-like proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G13780No description available.scaffold_1-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G018240Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q8LAN3_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunitchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G27550No description available.scaffold_4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G03770name=GSVIVG01017841001;chr5-View


Download

Gene id
Species
Description
Chromosome
Strand