Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G19810No description available.scaffold_2+View
AL5G00240No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G01290ribose-5-phosphate isomerase 2 Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death. ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).2-View
AT1G71100RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, response to karrikin, cellulose biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: ribose-5-phosphate isomerase 2 (TAIR:AT2G01290.1); Has 5045 Blast hits to 5045 proteins in 1956 species: Archae - 235; Bacteria - 3584; Metazoa - 111; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 829 (source: NCBI BLink). Ribose 5-phosphate isomerase, type A protein Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G20830No description available.A02+View
BR06G35680No description available.A06+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G06000No description available.Chr1+View
CL05G23300No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G06390No description available.CM3.5_scaffold00016-View
CM00005G02640No description available.CM3.5_scaffold00005-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00065G01130No description available.supercontig_65-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G16900No description available.scaffold_2+View
CRU_005G00230No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00034G00840No description available.scaffold00034+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G16780No description available.scaffold_7+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G06330Probable ribose-5-phosphate isomerase (similar to)scf0513158-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G41160No description available.Gm10+View
GM20G26110No description available.Gm20-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G16620No description available.Chr08+View
GR05G16320No description available.Chr05-View
GR02G18110No description available.Chr02-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G038000No description available.chr5+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G001920No description available.13+View
MD16G000490No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03264G00130No description available.scaffold03264+View
ME03604G00190No description available.scaffold03604+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G108440ribose-5-phosphate isomerase Achr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G33160No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G12760No description available.Chr08-View
PT10G11530No description available.Chr10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G009380Ribose-5-phosphate isomerase (AHRD V1 ***- A8IRQ1_CHLRE); contains Interpro domain(s) IPR004788 Ribose 5-phosphate isomerasechr05-View
ST04G006080Ribose-5-phosphate isomerase (AHRD V1 ***- A8IRQ1_CHLRE); contains Interpro domain(s) IPR004788 Ribose 5-phosphate isomerasechr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G27810No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G26270similar to AT1G71100|RSW10 (RADIAL SWELLING 10)ch5-6+View
TP2G12750similar to AT2G01290|ribose-5-phosphate isomerasech2-4-View


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Gene id
Species
Description
Chromosome
Strand