Anchorpoints

Gene id
SL03G120260
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL06G066730Coatomer beta%26apos subunit (AHRD V1 ***- Q0CXS2_ASPTN)%3B contains Interpro domain(s) IPR016453 Coatomer%2C beta' subunitch06+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G29800No description available.scaffold_2-View
AL1G47340No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15980Coatomer, beta' subunit Coatomer, beta' subunit; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, COPI vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), Coatomer, beta' subunit (InterPro:IPR016453), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1).3-View
AT1G79990structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, endomembrane system, COPI vesicle coat; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Coatomer, WD associated region (InterPro:IPR006692), WD40 repeat (InterPro:IPR001680), Integral membrane protein SYS1-related (InterPro:IPR019185), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, beta' subunit (TAIR:AT1G52360.1); Has 74874 Blast hits to 32688 proteins in 816 species: Archae - 58; Bacteria - 8441; Metazoa - 30042; Fungi - 16255; Plants - 9898; Viruses - 0; Other Eukaryotes - 10180 (source: NCBI BLink). structural molecules1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G32920No description available.A01+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G16540No description available.Bvchr9.sca026-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G01900No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00067G00040No description available.CM3.5_scaffold00067-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G14950No description available.scaffold_3-View
CRU_002G26070No description available.scaffold_2-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G25260No description available.scaffold_6-View
EG0010G25530No description available.scaffold_10+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G00790Coatomer subunit beta'-1 (Beta'-COP 1) (putative)LG1-View
FV6G16530Coatomer subunit beta'-1 (Beta'-COP 1) (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G22140No description available.Gm08+View
GM15G01680No description available.Gm15-View
GM13G43680No description available.Gm13-View
GM07G03890No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G13280No description available.Chr09-View
GR06G09900No description available.Chr06+View
GR11G07720No description available.Chr11+View
GR02G05890No description available.Chr02-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G015640No description available.17+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02581G00050No description available.scaffold02581+View
ME02196G00200No description available.scaffold02196-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G102267coatomer subunit beta-like proteinchr2+View
MT4G011950coatomer subunit beta-like proteinchr4-View
MT4G006350coatomer WD associated domain proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G05820No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G17920No description available.Chr01-View
PT03G05630No description available.Chr03+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29872G00170No description available.29872-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G036850Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR017986 WD40 repeat, regionchr03+View
ST06G023220Coatomer subunit beta&apos (AHRD V1 **-- E2C5N9_9HYME); contains Interpro domain(s) IPR016453 Coatomer, beta' subunitchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G08580No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G35770similar to AT1G79990|protein binding / structural moleculech5-7+View
TP1G38970similar to AT1G52360|coatomer protein complex, subunit beta 2 (beta prime), putativech1-2+View


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Gene id
Species
Description
Chromosome
Strand