Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL02G065170Laccase-22 (AHRD V1 **-- LAC22_ORYSJ)%3B contains Interpro domain(s) IPR001117 Multicopper oxidase%2C type 1ch02+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G03390No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G66920SKU5 similar 17 SKU5 similar 17 (sks17); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: response to karrikin; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5+View
AT2G23630SKU5 similar 16 SKU5 similar 16 (sks16); FUNCTIONS IN: pectinesterase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 15 (TAIR:AT4G37160.1); Has 5309 Blast hits to 5276 proteins in 999 species: Archae - 6; Bacteria - 1673; Metazoa - 270; Fungi - 1945; Plants - 1254; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G13380No description available.A04-View
BR07G11530No description available.A07-View
BR09G08340No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G09270No description available.Bvchr6.sca003+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G16890No description available.Chr1-View
CL02G13140No description available.Chr2-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G05640No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G03920No description available.supercontig_6+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G03100No description available.scaffold_7-View
CRU_008G26740No description available.scaffold_8-View
CRU_004G02770No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G02510No description available.scaffold00006+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G07630No description available.scaffold_9+View
EG0008G16480No description available.scaffold_8-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G36940L-ascorbate oxidase homolog, Precursor (similar to)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G06290No description available.Gm11+View
GM01G38980No description available.Gm01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G07300No description available.Chr08-View
GR07G20970No description available.Chr07-View
GR11G10440No description available.Chr11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03235G00340No description available.scaffold03235-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G018270multi-copper oxidase-like proteinchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G16210No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G03820No description available.Chr07-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29676G00350No description available.29676+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G032620Laccase-22 (AHRD V1 **-- LAC22_ORYSJ); contains Interpro domain(s) IPR001117 Multicopper oxidase, type 1chr02+View
ST02G011890Laccase-22 (AHRD V1 **-- LAC22_ORYSJ); contains Interpro domain(s) IPR001117 Multicopper oxidase, type 1chr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G04740No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G34630similar to AT4G37160|sks15 (SKU5 Similar 15)ch7-6+View
TP2G29740similar to AT5G66920|sks17 (SKU5 Similar 17)ch2-4-View


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Gene id
Species
Description
Chromosome
Strand