Anchorpoints
- Gene id
- SL02G079740
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G21350 | No description available. | scaffold_7 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G21350 | Encodes a U-box/ARM repeat protein required fore self-incompatibility. plant U-box 8 (PUB8); FUNCTIONS IN: ubiquitin-protein ligase activity, binding, zinc ion binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 13 (TAIR:AT3G46510.1); Has 3561 Blast hits to 3109 proteins in 223 species: Archae - 0; Bacteria - 18; Metazoa - 344; Fungi - 298; Plants - 2564; Viruses - 3; Other Eukaryotes - 334 (source: NCBI BLink). plant U-box 8 | 4 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00043G00790 | No description available. | scaffold00043 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G11660 | No description available. | A01 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G22520 | No description available. | Chr1 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00007G03640 | No description available. | CM3.5_scaffold00007 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00027G01670 | No description available. | supercontig_27 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G19110 | No description available. | scaffold_7 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00010G01970 | No description available. | scaffold00010 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0004G07080 | No description available. | scaffold_4 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV3G08010 | U-box domain-containing protein 8 (putative) | LG3 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM07G30760 | No description available. | Gm07 | - | View |
GM15G07050 | No description available. | Gm15 | - | View |
GM08G06560 | No description available. | Gm08 | + | View |
GM13G32290 | No description available. | Gm13 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G02030 | No description available. | Chr11 | - | View |
GR10G25370 | No description available. | Chr10 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD10G025100 | No description available. | 10 | - | View |
MD05G002450 | No description available. | 5 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME05116G00120 | No description available. | scaffold05116 | + | View |
ME03818G00270 | No description available. | scaffold03818 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT2G011140 | plant U-box protein | chr2 | - | View |
MT4G091880 | plant U-box protein | chr4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_004G02940 | No description available. | scaffold_4 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT11G03330 | No description available. | Chr11 | - | View |
PT04G02880 | No description available. | Chr04 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29842G02010 | No description available. | 29842 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST02G022750 | U-box domain-containing protein (Fragment) (AHRD V1 ***- B1P3M5_ARAHA); contains Interpro domain(s) IPR011989 Armadillo-like helical | chr02 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0006G19930 | No description available. | scaffold_6 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G19440 | similar to AT4G21350|PUB8 (PLANT U-BOX 8) | ch7-4 | - | View |