Anchorpoints

Gene id
SL01G108610
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SL02G090680Cyclin-dependent kinase inhibitor 7 (AHRD V1 *-** KRP7_ARATH)%3B contains Interpro domain(s) IPR016701 Cyclin-dependent kinase inhibitor%2C plantch02+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G43900No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G49620ICK5; FUNCTIONS IN: cyclin binding, cyclin-dependent protein kinase inhibitor activity; INVOLVED IN: negative regulation of cyclin-dependent protein kinase activity; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor (InterPro:IPR003175), Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701); BEST Arabidopsis thaliana protein match is: KIP-related protein 6 (TAIR:AT3G19150.1); Has 254 Blast hits to 244 proteins in 41 species: Archae - 0; Bacteria - 7; Metazoa - 4; Fungi - 18; Plants - 204; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). Cyclin-dependent kinase inhibitor family protein Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle.1-View
AT3G19150KIP-related protein 6 KIP-related protein 6 (KRP6); FUNCTIONS IN: cyclin binding, cyclin-dependent protein kinase inhibitor activity; INVOLVED IN: negative regulation of cyclin-dependent protein kinase activity, DNA endoreduplication; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: D pollen mother cell meiosis stage, C tetrad of megaspores, B meiosis of megaspore mother cell; CONTAINS InterPro DOMAIN/s: Cyclin-dependent kinase inhibitor, plant (InterPro:IPR016701), Cyclin-dependent kinase inhibitor (InterPro:IPR003175); BEST Arabidopsis thaliana protein match is: Cyclin-dependent kinase inhibitor family protein (TAIR:AT1G49620.1); Has 1712 Blast hits to 484 proteins in 111 species: Archae - 0; Bacteria - 136; Metazoa - 266; Fungi - 200; Plants - 207; Viruses - 3; Other Eukaryotes - 900 (source: NCBI BLink). Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type cyclins. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. KRP6 appears to be targeted for degradation by RHF1a and RHF2a to allow mitotic divisions during gametogenesis. In addition, KRP6 transcript levels rise prior to and drop following the meitotic divisions of gametogenesis. Elevated levels of KRP6 negatively affect plant development and fertility.3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00034G00450No description available.CM3.5_scaffold00034+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00062G00280No description available.supercontig_62-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G18100No description available.scaffold_3-View
CRU_001G36910No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G02260No description available.scaffold00006-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G10690No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G33420Cyclin-dependent kinase inhibitor 7 (probable)LG3-View
FV1G18530Cyclin-dependent kinase inhibitor 6 (probable)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G06050No description available.Gm11-View
GM17G20200No description available.Gm17-View
GM01G39220No description available.Gm01+View
GM02G15100No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G21180No description available.Chr07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G012370No description available.chr4+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G017600cyclin-dependent kinase inhibitor family proteinchr5-View
MT4G086450cyclin-dependent kinase inhibitor family proteinchr4-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G14210No description available.Chr04-View
PT05G13750No description available.Chr05+View
PT07G04230No description available.Chr07+View
PT09G10360No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29801G01480No description available.29801-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G045850Cyclin-dependent kinase inhibitor 12 (AHRD V1 ***- Q6T2Z2_SOYBN); contains Interpro domain(s) IPR016701 Cyclin-dependent kinase inhibitor, plantchr01+View
ST02G032160Cyclin-dependent kinase inhibitor (AHRD V1 ***- Q8GUA2_TOBAC); contains Interpro domain(s) IPR016701 Cyclin-dependent kinase inhibitor, plantchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G09450No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G17220similar to AT3G19150|KRP6 (KIP-RELATED PROTEIN 6)ch3-1-View
TP1G36490similar to AT1G49620|ICK5ch1-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G06910name=GSVIVG01031765001;chr3-View


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Chromosome
Strand