Anchorpoints

Gene id
SL01G107160
Organism
Solanum lycopersicum

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G44290No description available.scaffold_1+View
AL3G21190No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G49910Encodes a homolog of the yeast and human BUB3 (BUDDING UNINHIBITED BY BENZYMIDAZOL 3) protein. Yeast and human BUB3s function in spindle assembly checkpoint control. BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.2 (BUB3.2); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G19590.1); Has 8710 Blast hits to 6264 proteins in 448 species: Archae - 22; Bacteria - 1987; Metazoa - 2791; Fungi - 2014; Plants - 703; Viruses - 0; Other Eukaryotes - 1193 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein1+View
AT3G19590BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 (BUB3.1); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G49910.1); Has 7284 Blast hits to 5351 proteins in 449 species: Archae - 14; Bacteria - 1710; Metazoa - 2206; Fungi - 1743; Plants - 568; Viruses - 0; Other Eukaryotes - 1043 (source: NCBI BLink). Encodes a protein that may have a role in the spindle assembly checkpoint. Transducin/WD40 repeat-like superfamily protein3+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00164G00290No description available.scaffold00164+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G03200No description available.A08-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G00810No description available.Bvchr8.sca014-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G08640No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00031G04740No description available.CM3.5_scaffold00031-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00106G00570No description available.supercontig_106+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_001G37200No description available.scaffold_1+View
CRU_003G18540No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00084G00280No description available.scaffold00084-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G08370No description available.scaffold_9+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G05360Mitotic checkpoint protein BUB3 (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G40381No description available.Gm10+View
GM20G26890No description available.Gm20-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G23210No description available.Chr05+View
GR13G05020No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G000620No description available.chr1+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G005120mitotic checkpoint protein BUB3chr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G39950mitotic checkpoint protein, putative, expressed7+View
OS03G33580mitotic checkpoint protein, putative, expressed3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_008G16130No description available.scaffold_8-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G29510No description available.Chr01+View
PT09G08920No description available.Chr09+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28152G00390No description available.28152-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G044350Mitotic checkpoint protein BUB3 (AHRD V1 **-- B6UH61_MAIZE); contains Interpro domain(s) IPR017986 WD40 repeat, regionchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G11100No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G17630similar to AT3G19590|WD-40 repeat family protein / mitotic checkpoint protein, putativech3-1+View
TP1G36790similar to AT1G49910|WD-40 repeat family protein / mitotic checkpoint protein, putativech1-2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G09960name=GSVIVG01037848001;chr3-View


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Chromosome
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