Anchorpoints
- Gene id
- SL01G080530
- Organism
- Solanum lycopersicum
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL3G06360 | No description available. | scaffold_3 | + | View |
AL6G19040 | No description available. | scaffold_6 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G18900 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: P4H isoform 2 (TAIR:AT3G06300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 5 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00019G04570 | No description available. | scaffold00019 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR10G15890 | No description available. | A10 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G06340 | No description available. | Chr5 | + | View |
CL06G05400 | No description available. | Chr6 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G06960 | No description available. | CM3.5_scaffold00006 | + | View |
CM00047G02570 | No description available. | CM3.5_scaffold00047 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00016G00830 | No description available. | supercontig_16 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G05490 | No description available. | scaffold_3 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00011G02230 | No description available. | scaffold00011 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G29580 | No description available. | scaffold_8 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV4G11350 | Prolyl 4-hydroxylase subunit alpha-1, Precursor (probable) | LG4 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM15G10670 | No description available. | Gm15 | - | View |
GM17G02430 | No description available. | Gm17 | + | View |
GM07G38330 | No description available. | Gm07 | - | View |
GM13G28380 | No description available. | Gm13 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR11G18280 | No description available. | Chr11 | + | View |
GR06G25650 | No description available. | Chr06 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G023930 | No description available. | chr6 | + | View |
LJ4G038720 | No description available. | chr4 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD16G013100 | No description available. | 16 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME01551G02940 | No description available. | scaffold01551 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G118560 | prolyl 4-hydroxylase subunit alpha-like protein | chr4 | + | View |
MT2G020800 | prolyl 4-hydroxylase subunit alpha-like protein | chr2 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G13780 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT10G02720 | No description available. | Chr10 | - | View |
PT08G19770 | No description available. | Chr08 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC29726G00650 | No description available. | 29726 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST01G022480 | Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q8LAN3_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunit | chr01 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G27550 | No description available. | scaffold_4 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G25490 | similar to AT5G18900|oxidoreductase, 2OG-Fe(II) oxygenase family protein | ch6-6 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV05G03770 | name=GSVIVG01017841001; | chr5 | - | View |