Anchorpoints

Gene id
RC30170G04380
Organism
Ricinus communis

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
RC29634G00260No description available.29634+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G28860No description available.scaffold_1+View
AL6G37130No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G21340basic helix-loop-helix (bHLH) DNA-binding superfamily protein B70; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root endodermis, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G05170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View
AT2G20100basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29100.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).2+View
AT4G05170basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G21340.1); Has 1452 Blast hits to 1452 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 4; Plants - 1443; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR10G02010No description available.A10-View
BR01G30510No description available.A01+View
BR09G23590No description available.A09+View
BR09G13950No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G08920No description available.Bvchr1.sca001+View
BV6G16100No description available.Bvchr6.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G20040No description available.Chr1-View
CL05G19860No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM01596G05180No description available.CM3.5_scaffold01596+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G01680No description available.supercontig_6-View
CP00099G00350No description available.supercontig_99+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G31890No description available.scaffold_6-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G04610No description available.scaffold00002-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G15230No description available.scaffold_6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G05971No description available.Gm02+View
GM16G24661No description available.Gm16+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G06550No description available.Chr08+View
GR03G01290No description available.Chr03+View
GR09G19960No description available.Chr09+View
GR10G00820No description available.Chr10+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G015540No description available.12+View
MD08G001650No description available.8+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07520G02050No description available.scaffold07520-View
ME10524G00120No description available.scaffold10524-View
ME06512G00470No description available.scaffold06512-View
ME07012G00880No description available.scaffold07012-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G112170BHLH transcription factor-like proteinchr3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G53990ethylene-responsive protein related, putative, expressed4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G38310No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G23080No description available.Chr05-View
PT02G03240No description available.Chr02+View
PT07G02020No description available.Chr07+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G084880BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch02+View
SL04G080710BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028010BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingchr02+View
ST04G034110BHLH transcription factor-like protein (AHRD V1 *-*- Q5ZAK6_ORYSJ); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingchr04-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G02670No description available.scaffold_1+View
TC0008G03100No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G23870similar to AT1G27660|ethylene-responsive protein -relatedch1-1+View
TP7G19430similar to AT4G21340|B70ch7-4+View
TP3G33390similar to AT2G20100|ethylene-responsive family proteinch3-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G01580name=GSVIVG01018886001;chr4-View
VV18G09370name=GSVIVG01009761001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G53470No description available.1+View


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Gene id
Species
Description
Chromosome
Strand