Anchorpoints

Gene id
RC30131G03590
Organism
Ricinus communis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G28300No description available.scaffold_4+View
AL5G24550No description available.scaffold_5+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G54490NRPE5-like protein of unknown function; homologous to budding yeast RPB5 'RNA polymerase II fifth largest subunit, E' (RPB5E); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: Eukaryotic rpb5 RNA polymerase subunit family protein (TAIR:AT3G57080.1); Has 766 Blast hits to 766 proteins in 283 species: Archae - 110; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 119; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink). RNA polymerase II fifth largest subunit, E3+View
AT2G41340'RNA polymerase II fifth largest subunit, D' (RPB5D); FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase, Rpb5, N-terminal (InterPro:IPR005571), RNA polymerase, subunit H/Rpb5 C-terminal (InterPro:IPR000783), DNA-directed RNA polymerase, RPB5 subunit (InterPro:IPR014381); BEST Arabidopsis thaliana protein match is: Eukaryotic rpb5 RNA polymerase subunit family protein (TAIR:AT3G57080.1); Has 971 Blast hits to 971 proteins in 339 species: Archae - 231; Bacteria - 0; Metazoa - 155; Fungi - 216; Plants - 119; Viruses - 8; Other Eukaryotes - 242 (source: NCBI BLink). RNA polymerase II fifth largest subunit, D NRPE5-like protein of unknown function; homologous to budding yeast RPB52+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G04630No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G16540No description available.Bvchr2.sca016-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00005G01970No description available.supercontig_5-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_005G19860No description available.scaffold_5+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G13630No description available.scaffold_11-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G17200DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (probable)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G21565No description available.Gm11+View
GM04G26715No description available.Gm04+View
GM19G31250No description available.Gm19-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05875G02930No description available.scaffold05875-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G01650No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G02550No description available.Chr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G16440No description available.scaffold_10r+View
TC0005G14220No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G07930similar to AT3G54490|RPB5E (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, E)ch5-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G00220name=GSVIVG01000665001;chr13+View


Download

Gene id
Species
Description
Chromosome
Strand