Anchorpoints
- Gene id
- RC29904G00710
- Organism
- Ricinus communis
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G17820 | No description available. | scaffold_4 | + | View |
AL1G04250 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G04810 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT2G32730.1); Has 1171 Blast hits to 1071 proteins in 297 species: Archae - 14; Bacteria - 33; Metazoa - 390; Fungi - 382; Plants - 143; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | 1 | + | View |
AT2G32730 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | 2 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00089G00090 | No description available. | scaffold00089 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G11450 | No description available. | A05 | - | View |
BR04G19480 | No description available. | A04 | + | View |
BR03G16320 | No description available. | A03 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV3G11320 | No description available. | Bvchr3.sca012 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL06G07590 | No description available. | Chr6 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00043G01170 | No description available. | CM3.5_scaffold00043 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00059G01310 | No description available. | supercontig_59 | + | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G13640 | No description available. | scaffold_4 | + | View |
CRU_001G03710 | No description available. | scaffold_1 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00055G00190 | No description available. | scaffold00055 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G00550 | No description available. | scaffold_8 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G03410 | No description available. | Chr05 | - | View |
GR05G13100 | No description available. | Chr05 | - | View |
GR06G22210 | No description available. | Chr06 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD09G015080 | No description available. | 9 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME02421G00450 | No description available. | scaffold02421 | + | View |
ME03332G01410 | No description available. | scaffold03332 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G00620 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT17G05440 | No description available. | Chr17 | + | View |
PT01G31430 | No description available. | Chr01 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G091750 | 26S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH)%3B contains Interpro domain(s) IPR016642 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit | ch09 | + | View |
SL05G053650 | 26S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH)%3B contains Interpro domain(s) IPR016642 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit | ch05 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G028270 | 26S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH); contains Interpro domain(s) IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr09 | + | View |
ST05G026520 | 26S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH); contains Interpro domain(s) IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0004G20950 | No description available. | scaffold_4 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP4G15070 | similar to AT2G32730|26S proteasome regulatory subunit, putative | ch4-6 | + | View |
TP1G03650 | similar to AT1G04810|26S proteasome regulatory subunit, putative | ch1-1 | + | View |