Anchorpoints

Gene id
RC29904G00710
Organism
Ricinus communis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G17820No description available.scaffold_4+View
AL1G04250No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G0481026S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT2G32730.1); Has 1171 Blast hits to 1071 proteins in 297 species: Archae - 14; Bacteria - 33; Metazoa - 390; Fungi - 382; Plants - 143; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink). 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit1+View
AT2G3273026S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00089G00090No description available.scaffold00089+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G11450No description available.A05-View
BR04G19480No description available.A04+View
BR03G16320No description available.A03+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV3G11320No description available.Bvchr3.sca012-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G07590No description available.Chr6+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00043G01170No description available.CM3.5_scaffold00043-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00059G01310No description available.supercontig_59+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G13640No description available.scaffold_4+View
CRU_001G03710No description available.scaffold_1+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00055G00190No description available.scaffold00055+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G00550No description available.scaffold_8-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G03410No description available.Chr05-View
GR05G13100No description available.Chr05-View
GR06G22210No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G015080No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02421G00450No description available.scaffold02421+View
ME03332G01410No description available.scaffold03332-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G00620No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G05440No description available.Chr17+View
PT01G31430No description available.Chr01+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G09175026S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH)%3B contains Interpro domain(s) IPR016642 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunitch09+View
SL05G05365026S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH)%3B contains Interpro domain(s) IPR016642 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunitch05+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G02827026S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH); contains Interpro domain(s) IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitchr09+View
ST05G02652026S proteasome regulatory subunit (AHRD V1 ***- O48844_ARATH); contains Interpro domain(s) IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunitchr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G20950No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G15070similar to AT2G32730|26S proteasome regulatory subunit, putativech4-6+View
TP1G03650similar to AT1G04810|26S proteasome regulatory subunit, putativech1-1+View


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Gene id
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Description
Chromosome
Strand