Anchorpoints

Gene id
RC29784G00090
Organism
Ricinus communis

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
RC30170G06050No description available.30170-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G21310No description available.scaffold_1-View
AL7G04960No description available.scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G202702-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G66060.1); Has 2479 Blast hits to 2467 proteins in 338 species: Archae - 0; Bacteria - 393; Metazoa - 997; Fungi - 73; Plants - 409; Viruses - 15; Other Eukaryotes - 592 (source: NCBI BLink).1-View
AT4G358102-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G17720.1); Has 2430 Blast hits to 2416 proteins in 335 species: Archae - 0; Bacteria - 388; Metazoa - 1006; Fungi - 72; Plants - 400; Viruses - 15; Other Eukaryotes - 549 (source: NCBI BLink).4+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00001G01400No description available.scaffold00001+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G14620No description available.A06-View
BR01G02610No description available.A01-View
BR08G18120No description available.A08-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G01420No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G20800No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G09780No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G03060No description available.supercontig_6-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G04130No description available.scaffold_7-View
CRU_001G18970No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G01770No description available.scaffold00017-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G21580No description available.scaffold_10-View
EG0009G19380No description available.scaffold_9+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G08560No description available.Gm11-View
GM01G36740No description available.Gm01+View
GM02G04990No description available.Gm02+View
GM16G23030No description available.Gm16+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G06180No description available.Chr08+View
GR07G19060No description available.Chr07+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G028920No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G010840No description available.2+View
MD15G017570No description available.15+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G01590No description available.scaffold06512-View
ME07520G03040No description available.scaffold07520-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G022960prolyl 4-hydroxylase alpha-like proteinchr5-View
MT8G074810prolyl 4-hydroxylase alpha-like proteinchr8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G36820No description available.scaffold_1+View
PPE_007G19540No description available.scaffold_7-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G01670No description available.Chr02+View
PT05G24530No description available.Chr05-View
PT05G10800No description available.Chr05+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G033320Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q9FKX6_ARATH)%3B contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase%2C alpha subunitch03+View
SL02G083390Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q9FKX6_ARATH)%3B contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase%2C alpha subunitch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G008960Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q9FKX6_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunitchr03+View
ST02G026680Prolyl 4-hydroxylase alpha subunit-like protein (AHRD V1 ***- Q9FKX6_ARATH); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunitchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G04920No description available.scaffold_8-View
TC0001G01090No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G33600similar to AT4G35810|oxidoreductase, 2OG-Fe(II) oxygenase family proteinch7-6+View
TP1G18020similar to AT1G20270|oxidoreductase, 2OG-Fe(II) oxygenase family proteinch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G12280name=GSVIVG01005191001;chrUn-View
VV18G01130name=GSVIVG01008745001;chr18+View


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Gene id
Species
Description
Chromosome
Strand