Anchorpoints

Gene id
RC28725G00120
Organism
Ricinus communis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G11090No description available.scaffold_1-View
AL2G05030No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G60930RECQ helicase L4B RECQ helicase L4B (RECQ4B); FUNCTIONS IN: in 8 functions; INVOLVED IN: DNA recombination; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), HRDC-like (InterPro:IPR010997), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: DNA helicase (RECQl4A) (TAIR:AT1G10930.1); Has 28171 Blast hits to 28052 proteins in 2731 species: Archae - 327; Bacteria - 17551; Metazoa - 2839; Fungi - 1949; Plants - 1368; Viruses - 5; Other Eukaryotes - 4132 (source: NCBI BLink). AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.1-View
AT1G10930RECQ4A; FUNCTIONS IN: helicase activity, ATP-dependent 3'-5' DNA helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding; INVOLVED IN: chromosome organization, response to DNA damage stimulus, double-strand break repair via homologous recombination; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), RQC domain (InterPro:IPR018982), DNA helicase, ATP-dependent, RecQ type (InterPro:IPR004589), DNA helicase, ATP-dependent, RecQ type, N-terminal (InterPro:IPR018329), DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site (InterPro:IPR002464), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), Helicase/RNase D C-terminal, HRDC domain (InterPro:IPR002121); BEST Arabidopsis thaliana protein match is: RECQ helicase L4B (TAIR:AT1G60930.1); Has 34923 Blast hits to 34782 proteins in 2821 species: Archae - 633; Bacteria - 21324; Metazoa - 3687; Fungi - 2728; Plants - 1606; Viruses - 18; Other Eukaryotes - 4927 (source: NCBI BLink). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. DNA helicase (RECQl4A)1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G50460No description available.A09-View
BR05G14320No description available.A05+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G04130No description available.scaffold_2+View
CRU_001G09980No description available.scaffold_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00219G00070No description available.scaffold00219+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G29151No description available.Gm12+View
GM08G20070No description available.Gm08-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G03860No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G030130No description available.chr6+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02817G00160No description available.scaffold02817-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G01580No description available.Chr03+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G103960ATP-dependent DNA helicase Q1 (AHRD V1 *-** C1GRE2_PARBA)%3B contains Interpro domain(s) IPR004589 DNA helicase%2C ATP-dependent%2C RecQ typech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G040950ATP-dependent DNA helicase (AHRD V1 *-** E0S837_ENCIT); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ typechr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G08530No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G03660similar to AT1G60930|ATRECQ4B (ARABIDOPSIS RECQ HELICASE L4B)ch2-2+View


Download

Gene id
Species
Description
Chromosome
Strand