Anchorpoints

Gene id
PT19G13010
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT13G15700No description available.Chr13+View
PT16G13620No description available.Chr16+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G01880RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). RING/U-box superfamily protein5+View
AT5G05280RING/U-box superfamily protein Encodes a RING-finger E3 ligase protein that controls anther dehiscence by positively regulating the expression of DAD1 in the jasmonic acid biosynthesis pathway. RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00076G00190No description available.CM3.5_scaffold00076+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G00640No description available.supercontig_19-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_006G04100No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G31100RING-H2 finger protein ATL3C (similar to)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G44640No description available.Gm18-View
GM09G41180No description available.Gm09-View
GM06G14830No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G12770No description available.Chr11-View
GR11G20940No description available.Chr11+View
GR13G27180No description available.Chr13-View
GR05G00460No description available.Chr05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G019540No description available.12+View
MD04G014050No description available.4+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09360G00360No description available.scaffold09360-View
ME10689G00630No description available.scaffold10689+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G094000RING-H2 zinc finger proteinchr3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS11G02250zinc finger, C3HC4 type domain containing protein, expressed11-View
OS12G02210RING finger protein, putative, expressed12-View
OS01G60730RING-H2 finger protein, putative, expressed1-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29729G00970No description available.29729+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G35630No description available.scaffold_9+View
TC0004G15760No description available.scaffold_4-View
TC0010G01290No description available.scaffold_10r+View
TC0010G17910No description available.scaffold_10r-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G28320No description available.3+View
ZM06G26690RING-H2 finger protein ATL5A6-View


Download

Gene id
Species
Description
Chromosome
Strand